RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 OR11H1Q8NG94 326 aa7.9□□□□□ -1.14
RFFL-212ENST00000584655 NRN1Q9NPD7 142 aa7.9□□□□□ -1.14
RFFL-212ENST00000584655 LINC00173Q6ZV60 143 aa7.9□□□□□ -1.15
RFFL-212ENST00000584655 OR4C5Q8NGB2 326 aa7.9□□□□□ -1.15
RFFL-212ENST00000584655 OTORQ9NRC9 128 aa7.9□□□□□ -1.15
RFFL-212ENST00000584655 A8MWL6 223 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 SPANXN1Q5VSR9 72 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 KLHDC1Q8N7A1 406 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 AGPAT4-IT1Q9H0P7 198 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 A0A087WW49 117 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 CRIP1P50238 77 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 Q8N6K4 173 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 NAA38Q9BRA0 125 aaKnown RBP7.89□□□□□ -1.15
RFFL-212ENST00000584655 C19orf24Q9BVV8 132 aa7.89□□□□□ -1.15
RFFL-212ENST00000584655 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 BUB3O43684 328 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 GNRH2O43555 120 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 COL5A1-AS1Q5SY13 56 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 C20orf173Q96LM9 149 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 RNF5Q99942 180 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 PAFAH1B2P68402 229 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 PSG3Q16557 428 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 FAM106AQ4KMX7 169 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 C1orf194Q5T5A4 169 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 KCNS1Q96KK3 526 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 IGF2BP2-AS1Q96M15 143 aa7.88□□□□□ -1.15
RFFL-212ENST00000584655 A0A087WWL8 130 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 FSTL3O95633 263 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 DLEU1O43261 78 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 SLC25A16P16260 332 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 ATP5IP56385 69 aaPredicted RBP7.87□□□□□ -1.15
RFFL-212ENST00000584655 PRSS22Q9GZN4 317 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 TRRAPQ9Y4A5 3859 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 NDUFS8O00217 210 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 JPT2Q9H910 190 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 FBLL1A6NHQ2 334 aaKnown RBP7.87□□□□□ -1.15
RFFL-212ENST00000584655 HSBP1L1C9JCN9 74 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 OR10AG1Q8NH19 301 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 PEF1Q9UBV8 284 aaKnown RBP7.87□□□□□ -1.15
RFFL-212ENST00000584655 CBY1Q9Y3M2 126 aa7.87□□□□□ -1.15
RFFL-212ENST00000584655 MIEN1Q9BRT3 115 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 KMT2BQ9UMN6 2715 aaPredicted RBP7.86□□□□□ -1.15
RFFL-212ENST00000584655 A6NDX4 124 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 D6R8Y8 96 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 HOXD3P31249 432 aaPredicted RBP7.86□□□□□ -1.15
RFFL-212ENST00000584655 CKS2P33552 79 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 TMEM136Q6ZRR5 245 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 RBPMS2Q6ZRY4 209 aaKnown RBP7.86□□□□□ -1.15
RFFL-212ENST00000584655 OOSP1A8MZH6 123 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 WDR73Q6P4I2 378 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 AP1S3Q96PC3 154 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 PRR25Q96S07 402 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 OSTCQ9NRP0 149 aa7.86□□□□□ -1.15
RFFL-212ENST00000584655 HBBP68871 147 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 LBHQ53QV2 105 aaPredicted RBP7.85□□□□□ -1.15
RFFL-212ENST00000584655 OR10J6PQ8NGY7 276 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 TSKUQ8WUA8 353 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 C3orf79P0CE67 100 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 DEFB131AP59861 70 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 YPEL3P61236 119 aaPredicted RBP7.85□□□□□ -1.15
RFFL-212ENST00000584655 C14orf178Q8N769 122 aaPredicted RBP7.85□□□□□ -1.15
RFFL-212ENST00000584655 C11orf52Q96A22 123 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 GRAMD2BQ96HH9 432 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 IZUMO1RA6ND01 250 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 BTF3P20290 206 aaKnown RBP7.85□□□□□ -1.15
RFFL-212ENST00000584655 STPG4Q8N801 248 aa7.85□□□□□ -1.15
RFFL-212ENST00000584655 A0A1B0GUT8 65 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 CD7P09564 240 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 TCTEX1D4Q5JR98 221 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 PRR9Q5T870 116 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 PRSS57Q6UWY2 283 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 VPREB3Q9UKI3 123 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 LAMTOR2Q9Y2Q5 125 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.84□□□□□ -1.15
RFFL-212ENST00000584655 RPL35AP18077 110 aaKnown RBP7.84□□□□□ -1.15
RFFL-212ENST00000584655 LOXL1Q08397 574 aaPredicted RBP7.84□□□□□ -1.15
RFFL-212ENST00000584655 FAM162BQ5T6X4 162 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 S100A7AQ86SG5 101 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 XCL2Q9UBD3 114 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 WI2-2373I1.2A0A1W2PRP0 233 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 IGHV3-53P01767 116 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 CD99P14209 185 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 FOXL1Q12952 345 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 FER1L6-AS1Q8NA97 138 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
RFFL-212ENST00000584655 hDV102S1A0JD36 115 aa7.83□□□□□ -1.16
RFFL-212ENST00000584655 FNDC10F2Z333 226 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms