RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 MGST1P10620 155 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-230ENST00000584042 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
CDK5RAP3-230ENST00000584042 APOC3P02656 99 aa12.3□□□□□ -0.44
CDK5RAP3-230ENST00000584042 PRR9Q5T870 116 aa12.3□□□□□ -0.44
CDK5RAP3-230ENST00000584042 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-230ENST00000584042 SVBPQ8N300 66 aa12.3□□□□□ -0.44
CDK5RAP3-230ENST00000584042 S100A1P23297 94 aa12.29□□□□□ -0.44
CDK5RAP3-230ENST00000584042 NUTF2P61970 127 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-230ENST00000584042 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
CDK5RAP3-230ENST00000584042 Q6AWC8 147 aa12.29□□□□□ -0.44
CDK5RAP3-230ENST00000584042 AURKAIP1Q9NWT8 199 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-230ENST00000584042 MGAM2Q2M2H8 2515 aa12.29□□□□□ -0.44
CDK5RAP3-230ENST00000584042 C7orf71A4D174 169 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 A8MZ25 164 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 M0R2Z0 102 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 SNAPINO95295 136 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 GPX1P07203 203 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 PFN1P07737 140 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 FAM162BQ5T6X4 162 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 GFI1BQ5VTD9 330 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 PRR27Q6MZM9 219 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 FAM231DQ6ZW35 169 aa12.28□□□□□ -0.44
CDK5RAP3-230ENST00000584042 B4DEV8 164 aa12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 M0R036 132 aa12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 ZNF80P51504 273 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 BTN1A1Q13410 526 aa12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 OR5I1Q13606 314 aa12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
CDK5RAP3-230ENST00000584042 LOC102724200A0A096LPH7 203 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 TRAV21A0A0B4J279 112 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 J3KRW8 73 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CRXO43186 299 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 SH2D1AO60880 128 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 INSP01308 110 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 IGHV4-30-4P0DP06 118 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RHEBQ15382 184 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 C1QTNF4Q9BXJ3 329 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 OSTCQ9NRP0 149 aa12.26□□□□□ -0.45
CDK5RAP3-230ENST00000584042 KIR2DL5BA0A0G2JN68 375 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 KIR2DL5BA0A0G2JPC4 375 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CRIP1P50238 77 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 FXYD7P58549 80 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 KIR3DS1Q14943 382 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 KIR2DL5AQ8N109 375 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 KIR2DL5BQ8NHK3 375 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 TUBA4BQ9H853 241 aa12.25□□□□□ -0.45
CDK5RAP3-230ENST00000584042 TRAV12-2A0A075B6T6 113 aa12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 FABP5P3A8MUU1 101 aa12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 P01737 135 aa12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RNASE4P34096 147 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 APOC4P55056 127 aa12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 ERVFC1-1P60608 527 aa12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 C15orf54Q8N8G6 183 aa12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 DAZAP1Q96EP5 407 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-230ENST00000584042 PPP1R2P9O14990 202 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 MT-ND4LP03901 98 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RNF212Q495C1 297 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CT83Q5H943 113 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 OR10G8Q8NGN5 311 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 ANAPC16Q96DE5 110 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RNASE7Q9H1E1 156 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-230ENST00000584042 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 A0A087WWC5 75 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 TRAV12-3A0A0B4J271 114 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 ZNF324O75467 553 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RPP21Q9H633 154 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 NOTCH1P46531 2555 aa12.22□□□□□ -0.45
CDK5RAP3-230ENST00000584042 C7orf77A4D0Y5 90 aa12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 GATCO43716 136 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CXCL1P09341 107 aa12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 V9GYV3 84 aa12.21□□□□□ -0.45
CDK5RAP3-230ENST00000584042 ZNF705GA8MUZ8 300 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 H7BYZ3 331 aa12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 UBE2CO00762 179 aa12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 PYGO2Q9BRQ0 406 aa12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
CDK5RAP3-230ENST00000584042 K7EIL1 84 aa12.19□□□□□ -0.46
CDK5RAP3-230ENST00000584042 RPS20P60866 119 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-230ENST00000584042 Q6ZQT7 251 aa12.19□□□□□ -0.46
CDK5RAP3-230ENST00000584042 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms