RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
RFFL-210ENST00000582308 NHLRC2Q8NBF2 726 aa6.96□□□□□ -1.3
RFFL-210ENST00000582308 MRAPQ8TCY5 172 aa6.96□□□□□ -1.3
RFFL-210ENST00000582308 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
RFFL-210ENST00000582308 NDFIP1Q9BT67 221 aa6.96□□□□□ -1.3
RFFL-210ENST00000582308 MLST8Q9BVC4 326 aa6.96□□□□□ -1.3
RFFL-210ENST00000582308 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 PGPEP1LA6NFU8 196 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 C9JCJ5 164 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 AMBPP02760 352 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 GPX1P07203 203 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 SFTA3P0C7M3 94 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 RBMY1A1P0DJD3 496 aaKnown RBP6.95□□□□□ -1.3
RFFL-210ENST00000582308 RBMY1CP0DJD4 496 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 GNG4P50150 75 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 CRIP1P50238 77 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 ZNF80P51504 273 aaPredicted RBP6.95□□□□□ -1.3
RFFL-210ENST00000582308 BTN1A1Q13410 526 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 RBMY1FQ15415 496 aaKnown RBP6.95□□□□□ -1.3
RFFL-210ENST00000582308 SOHLH1Q5JUK2 328 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 COX8CQ7Z4L0 72 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 CSNK1G2-AS1Q8NCQ2 148 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 ZC2HC1AQ96GY0 325 aa6.95□□□□□ -1.3
RFFL-210ENST00000582308 PRKDCP78527 4128 aaKnown RBP6.95□□□□□ -1.3
RFFL-210ENST00000582308 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 TRAV12-3A0A0B4J271 114 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 TMEM218A2RU14 115 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 C7orf71A4D174 169 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 UBE2CO00762 179 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 ZNF324O75467 553 aaPredicted RBP6.94□□□□□ -1.3
RFFL-210ENST00000582308 GCGP01275 180 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 FAM74A3Q4VXF1 159 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 SBSPONQ8IVN8 264 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 C1orf158Q8N1D5 194 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 OCC1Q8TAD7 63 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 C1QTNF4Q9BXJ3 329 aa6.94□□□□□ -1.3
RFFL-210ENST00000582308 K7EN84 100 aa6.93□□□□□ -1.3
RFFL-210ENST00000582308 INSP01308 110 aa6.93□□□□□ -1.3
RFFL-210ENST00000582308 TMEM241Q24JQ0 296 aa6.93□□□□□ -1.3
RFFL-210ENST00000582308 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
RFFL-210ENST00000582308 Q6AWC8 147 aa6.93□□□□□ -1.3
RFFL-210ENST00000582308 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
RFFL-210ENST00000582308 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
RFFL-210ENST00000582308 SH2D1AO60880 128 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 PRM2P04554 102 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 MGST1P10620 155 aaKnown RBP6.92□□□□□ -1.3
RFFL-210ENST00000582308 ADCYAP1P18509 176 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 OR5I1Q13606 314 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 NDUFA5Q16718 116 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 Q6ZWC4 215 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 LINC01551Q86U37 167 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 SMIM12Q96EX1 92 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 C11orf21Q9P2W6 132 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
RFFL-210ENST00000582308 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 TRAV21A0A0B4J279 112 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 F8W036 122 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 PFN1P07737 140 aaKnown RBP6.91□□□□□ -1.3
RFFL-210ENST00000582308 RPL23P62829 140 aaKnown RBP6.91□□□□□ -1.3
RFFL-210ENST00000582308 C10orf91Q5T1B1 145 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 PRR27Q6MZM9 219 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 ZNF705AQ6ZN79 300 aaPredicted RBP6.91□□□□□ -1.3
RFFL-210ENST00000582308 RNF183Q96D59 192 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 RCHY1Q96PM5 261 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 LINC01587Q99440 93 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 NIPSNAP3BQ9BS92 247 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 SDF2L1Q9HCN8 221 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 RETNQ9HD89 108 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 GOLT1BQ9Y3E0 138 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 MUC4Q99102 2169 aa6.91□□□□□ -1.3
RFFL-210ENST00000582308 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 ZNF705GA8MUZ8 300 aaPredicted RBP6.9□□□□□ -1.3
RFFL-210ENST00000582308 H7BYZ3 331 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 SPRY2O43597 315 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 MUC21Q5SSG8 566 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 ZNF575Q86XF7 245 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 TMEM208Q9BTX3 173 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 BIN3Q9NQY0 253 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 X6R8D5 127 aa6.9□□□□□ -1.3
RFFL-210ENST00000582308 FBN3Q75N90 2809 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 IGHV1OR15-1A0A075B7D0 117 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 AZU1P20160 251 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 ADIRFQ15847 76 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 ANXA2RQ3ZCQ2 193 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
RFFL-210ENST00000582308 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms