RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.57
CSNK1D-217ENST00000581241 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 WISP1O95388 367 aa11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
CSNK1D-217ENST00000581241 F5H768 121 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 MPDZO75970 2070 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 PLXNA2O75051 1894 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 BAALC-AS2P0C853 105 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 ARTNQ5T4W7 220 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 ORMDL1Q9P0S3 153 aa11.5□□□□□ -0.57
CSNK1D-217ENST00000581241 PRSS47A8MTI9 375 aa11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 IGLL5B9A064 214 aa11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 COA6Q5JTJ3 125 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 Q6ZVH6 145 aa11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 CNTRLQ7Z7A1 2325 aa11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 C17orf77Q96MU5 243 aa11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 EGR2P11161 476 aaPredicted RBP11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 RNASE13Q5GAN3 156 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-217ENST00000581241 RSPO1Q2MKA7 263 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 DYNAPQ8N1N2 210 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 C8orf31Q8N9H6 132 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 ZNF524Q96C55 264 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 IGLV1-44P01699 117 aa11.48□□□□□ -0.57
CSNK1D-217ENST00000581241 HERV-K104P63124 156 aa11.47□□□□□ -0.57
CSNK1D-217ENST00000581241 B5MCH6 92 aa11.47□□□□□ -0.57
CSNK1D-217ENST00000581241 H3BUA1 57 aa11.47□□□□□ -0.57
CSNK1D-217ENST00000581241 DEFB121Q5J5C9 76 aa11.47□□□□□ -0.57
CSNK1D-217ENST00000581241 IGF2BP2-AS1Q96M15 143 aa11.47□□□□□ -0.57
CSNK1D-217ENST00000581241 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.57
CSNK1D-217ENST00000581241 RBM3P98179 157 aaKnown RBP11.46□□□□□ -0.57
CSNK1D-217ENST00000581241 KMT2EQ8IZD2 1858 aa11.46□□□□□ -0.58
CSNK1D-217ENST00000581241 GNRH2O43555 120 aa11.46□□□□□ -0.58
CSNK1D-217ENST00000581241 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.58
CSNK1D-217ENST00000581241 FNDC1Q4ZHG4 1894 aaPredicted RBP11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 COL4A6Q14031 1691 aa11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 SLC25A29Q8N8R3 303 aa11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 IGLV3-9A0A075B6K5 115 aa11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 FOXE3Q13461 319 aa11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 LRRK1Q38SD2 2015 aa11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 APOC4P55056 127 aa11.45□□□□□ -0.58
CSNK1D-217ENST00000581241 CRYGCP07315 174 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 ICOSQ9Y6W8 199 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 THADAQ6YHU6 1953 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 TET1Q8NFU7 2136 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 Q9H8V8 135 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 NUPR1O60356 82 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 SH2D6Q7Z4S9 175 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 A0A0B4J2C4 111 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 TEX48A0A1B0GUV7 120 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 hADV29S1A0JD25 119 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 HOXB4P17483 251 aaPredicted RBP11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 NBL1P41271 181 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 UNQ6494/PRO21346Q6UXR6 183 aa11.44□□□□□ -0.58
CSNK1D-217ENST00000581241 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 IGKV2-29A2NJV5 120 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 IGHG2P01859 326 aa11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 RMI2Q96E14 147 aa11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 LENEPQ9Y5L5 61 aa11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 MDC1Q14676 2089 aaKnown RBP11.43□□□□□ -0.58
CSNK1D-217ENST00000581241 RS1O15537 224 aa11.42□□□□□ -0.58
CSNK1D-217ENST00000581241 Q8NFD4 153 aa11.42□□□□□ -0.58
CSNK1D-217ENST00000581241 J3QLI3 93 aa11.42□□□□□ -0.58
CSNK1D-217ENST00000581241 AGPAT4-IT1Q9H0P7 198 aa11.42□□□□□ -0.58
CSNK1D-217ENST00000581241 GP9P14770 177 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 LINC00173Q6ZV60 143 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 ANGP03950 147 aaKnown RBP11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 LY6G6EA0A0G2JKS1 128 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 MUSTN1Q8IVN3 82 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 KAAG1Q9UBP8 84 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 U3KQA8 63 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 KNL1Q8NG31 2342 aa11.41□□□□□ -0.58
CSNK1D-217ENST00000581241 CR1LQ2VPA4 569 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 PRR30Q53SZ7 412 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 HIGD1BQ9P298 99 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 IGFL3Q6UXB1 125 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 KNTC1P50748 2209 aa11.4□□□□□ -0.58
CSNK1D-217ENST00000581241 U3KQE9 123 aa11.39□□□□□ -0.59
CSNK1D-217ENST00000581241 TICRRQ7Z2Z1 1910 aa11.39□□□□□ -0.59
CSNK1D-217ENST00000581241 ATOX1O00244 68 aa11.39□□□□□ -0.59
CSNK1D-217ENST00000581241 TDRG1Q3Y452 100 aa11.39□□□□□ -0.59
CSNK1D-217ENST00000581241 A0A096LPF7 62 aa11.39□□□□□ -0.59
CSNK1D-217ENST00000581241 XCL1P47992 114 aa11.39□□□□□ -0.59
CSNK1D-217ENST00000581241 F6UB75 175 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms