RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 Q6ZTI0 123 aa14.12□□□□□ -0.15
SMG8-204ENST00000580498 TRGV11A0A075B6L2 103 aa14.11□□□□□ -0.15
SMG8-204ENST00000580498 C11orf72Q8NBR9 251 aa14.11□□□□□ -0.15
SMG8-204ENST00000580498 C18orf15Q96N68 181 aa14.11□□□□□ -0.15
SMG8-204ENST00000580498 EPPK1P58107 5090 aaKnown RBP14.11□□□□□ -0.15
SMG8-204ENST00000580498 A0A0J9YY99 117 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 PRSS29PA6NIE9 313 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 ATP6V0CP27449 155 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 SLAQ13239 276 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 C1orf134Q5TEV5 83 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 ACTR3CQ9C0K3 210 aaPredicted RBP14.1□□□□□ -0.15
SMG8-204ENST00000580498 TMPRSS5Q9H3S3 457 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 TMEM167BQ9NRX6 74 aa14.1□□□□□ -0.15
SMG8-204ENST00000580498 HMGB3O15347 200 aaKnown RBP14.09□□□□□ -0.15
SMG8-204ENST00000580498 ARL14EPLP0DKL9 152 aa14.09□□□□□ -0.15
SMG8-204ENST00000580498 GOLT1AQ6ZVE7 132 aa14.09□□□□□ -0.15
SMG8-204ENST00000580498 OR2T35Q8NGX2 323 aa14.09□□□□□ -0.15
SMG8-204ENST00000580498 ST6GAL2Q96JF0 529 aa14.09□□□□□ -0.15
SMG8-204ENST00000580498 TNFSF18Q9UNG2 199 aa14.09□□□□□ -0.15
SMG8-204ENST00000580498 SPINK4O60575 86 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 CXorf1O96002 111 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 STAG3L2P0CL84 134 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 STAG3L3P0CL85 134 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 PRR9Q5T870 116 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 Q6AWC8 147 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 SSX7Q7RTT5 188 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 IQCF2Q8IXL9 164 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 RAB24Q969Q5 203 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 NAGKQ9UJ70 344 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 KLF12Q9Y4X4 402 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 VPS13DQ5THJ4 4388 aa14.08□□□□□ -0.16
SMG8-204ENST00000580498 NACAE9PAV3 2078 aa14.07□□□□□ -0.16
SMG8-204ENST00000580498 TRAV21A0A0B4J279 112 aa14.07□□□□□ -0.16
SMG8-204ENST00000580498 MUC21Q5SSG8 566 aa14.07□□□□□ -0.16
SMG8-204ENST00000580498 Q6ZR54 194 aa14.07□□□□□ -0.16
SMG8-204ENST00000580498 C5orf17Q8NAS9 161 aa14.07□□□□□ -0.16
SMG8-204ENST00000580498 SPXQ9BT56 116 aa14.07□□□□□ -0.16
SMG8-204ENST00000580498 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMG8-204ENST00000580498 HOXA5P20719 270 aa14.06□□□□□ -0.16
SMG8-204ENST00000580498 GCHFRP30047 84 aa14.06□□□□□ -0.16
SMG8-204ENST00000580498 ZFP69Q49AA0 526 aa14.06□□□□□ -0.16
SMG8-204ENST00000580498 TTC32Q5I0X7 151 aa14.06□□□□□ -0.16
SMG8-204ENST00000580498 TREM1Q9NP99 234 aa14.06□□□□□ -0.16
SMG8-204ENST00000580498 FBLL1A6NHQ2 334 aaKnown RBP14.05□□□□□ -0.16
SMG8-204ENST00000580498 TAAR5O14804 337 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 TMEM183BQ1AE95 376 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 TMEM183AQ8IXX5 376 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 KCNS1Q96KK3 526 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 TP53TG3Q9ULZ0 132 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 LINC00588Q9Y4M8 146 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 BIRC6Q9NR09 4857 aa14.05□□□□□ -0.16
SMG8-204ENST00000580498 NBDYA0A0U1RRE5 68 aa14.04□□□□□ -0.16
SMG8-204ENST00000580498 PAX4O43316 350 aa14.04□□□□□ -0.16
SMG8-204ENST00000580498 AKR1C8PQ5T2L2 129 aa14.04□□□□□ -0.16
SMG8-204ENST00000580498 ZNRF2Q8NHG8 242 aa14.04□□□□□ -0.16
SMG8-204ENST00000580498 MRPL16Q9NX20 251 aaKnown RBP14.04□□□□□ -0.16
SMG8-204ENST00000580498 ICOSQ9Y6W8 199 aa14.04□□□□□ -0.16
SMG8-204ENST00000580498 TRGV4A0A0C4DH28 118 aa14.03□□□□□ -0.16
SMG8-204ENST00000580498 RPL7L1Q6DKI1 246 aaKnown RBP14.03□□□□□ -0.16
SMG8-204ENST00000580498 SDF2L1Q9HCN8 221 aa14.03□□□□□ -0.16
SMG8-204ENST00000580498 PRO0255Q9UI72 69 aa14.03□□□□□ -0.16
SMG8-204ENST00000580498 DNAH6Q9C0G6 4158 aa14.03□□□□□ -0.16
SMG8-204ENST00000580498 RTL8CO15255 209 aa14.02□□□□□ -0.17
SMG8-204ENST00000580498 PCNPQ8WW12 178 aaKnown RBP14.02□□□□□ -0.17
SMG8-204ENST00000580498 SH3BGRL3Q9H299 93 aa14.02□□□□□ -0.17
SMG8-204ENST00000580498 Q9H8V8 135 aa14.02□□□□□ -0.17
SMG8-204ENST00000580498 CTXND1A0A1B0GTU2 59 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 RNF222A6NCQ9 220 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 TCRAP04437 139 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 PPT1P50897 306 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 GNG5P63218 68 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 TDRG1Q3Y452 100 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 Q5BKY6 102 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 C6orf223Q8N319 242 aa14.01□□□□□ -0.17
SMG8-204ENST00000580498 NKX6-2Q9C056 277 aaPredicted RBP14.01□□□□□ -0.17
SMG8-204ENST00000580498 MUC4Q99102 2169 aa14□□□□□ -0.17
SMG8-204ENST00000580498 F6UZH7 168 aa14□□□□□ -0.17
SMG8-204ENST00000580498 ARPC5O15511 151 aa14□□□□□ -0.17
SMG8-204ENST00000580498 SUMO1P63165 101 aaKnown RBP14□□□□□ -0.17
SMG8-204ENST00000580498 CYB561D1Q8N8Q1 229 aa14□□□□□ -0.17
SMG8-204ENST00000580498 UPK3BQ9BT76 320 aa14□□□□□ -0.17
SMG8-204ENST00000580498 HHLA3Q9XRX5 114 aa14□□□□□ -0.17
SMG8-204ENST00000580498 MRPS16Q9Y3D3 137 aaKnown RBP14□□□□□ -0.17
SMG8-204ENST00000580498 TRAV8-1A0A0A6YYK1 113 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 A0A1W2PRE2 83 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 IFNA7P01567 189 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 MRPL23Q16540 153 aaKnown RBP13.99□□□□□ -0.17
SMG8-204ENST00000580498 SAPCD1Q5SSQ6 148 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 Q6ZQT7 251 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 SUN5Q8TC36 379 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 MDFICQ9P1T7 246 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 EPDR1Q9UM22 224 aa13.99□□□□□ -0.17
SMG8-204ENST00000580498 M0R2P5 195 aa13.98□□□□□ -0.17
SMG8-204ENST00000580498 FLI1Q01543 452 aaPredicted RBP13.98□□□□□ -0.17
SMG8-204ENST00000580498 SMUG1Q53HV7 270 aa13.98□□□□□ -0.17
SMG8-204ENST00000580498 STOML3Q8TAV4 291 aa13.98□□□□□ -0.17
SMG8-204ENST00000580498 RASL10AQ92737 203 aa13.98□□□□□ -0.17
SMG8-204ENST00000580498 PSG8Q9UQ74 426 aa13.98□□□□□ -0.17
SMG8-204ENST00000580498 A0A096LPF7 62 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms