RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
TRAF4-214ENST00000580073 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.9
TRAF4-214ENST00000580073 SLC51BQ86UW2 128 aa9.4□□□□□ -0.9
TRAF4-214ENST00000580073 MRPL53Q96EL3 112 aaKnown RBP9.4□□□□□ -0.9
TRAF4-214ENST00000580073 VGLL1Q99990 258 aa9.4□□□□□ -0.9
TRAF4-214ENST00000580073 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
TRAF4-214ENST00000580073 TIMM8BQ9Y5J9 83 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-214ENST00000580073 PGPA6NDG6 321 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 CBY3A6NI87 242 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 CXorf1O96002 111 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
TRAF4-214ENST00000580073 MBD3L1Q8WWY6 194 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 LINC01587Q99440 93 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
TRAF4-214ENST00000580073 MAP1LC3B2A6NCE7 125 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 GGTLC3B5MD39 225 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 CDKN1BP46527 198 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 GNG5P63218 68 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
TRAF4-214ENST00000580073 FAM74A1Q5RGS3 127 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 MAP1LC3BQ9GZQ8 125 aa9.38□□□□□ -0.91
TRAF4-214ENST00000580073 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 A0A1B0GV50 99 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 UMAD1C9J7I0 102 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 DIRC3C9JPN6 131 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 PRM2P04554 102 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 BTF3P20290 206 aaKnown RBP9.37□□□□□ -0.91
TRAF4-214ENST00000580073 SULT1A2P50226 295 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 CCL20P78556 96 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 TNP2Q05952 138 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 AAMDCQ9H7C9 122 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
TRAF4-214ENST00000580073 H7BYZ3 331 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 UBE2G2P60604 165 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 Q6ZQT7 251 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 CCDC28AQ8IWP9 274 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 SFT2D1Q8WV19 159 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 TMEM167BQ9NRX6 74 aa9.36□□□□□ -0.91
TRAF4-214ENST00000580073 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 HTN1P15515 57 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
TRAF4-214ENST00000580073 PRR9Q5T870 116 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 ALKAL2Q6UX46 152 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 DPPA3Q6W0C5 159 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 IQCF2Q8IXL9 164 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 Q8TAT8 98 aa9.35□□□□□ -0.91
TRAF4-214ENST00000580073 RNASE8Q8TDE3 154 aaKnown RBP9.35□□□□□ -0.91
TRAF4-214ENST00000580073 ABCA13Q86UQ4 5058 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 TRAV8-1A0A0A6YYK1 113 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 SNURFLB1AK76 121 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 TVP23CQ96ET8 276 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 SGK494Q96LW2 274 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 LINC00477Q96M19 166 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
TRAF4-214ENST00000580073 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 H3BNG1 76 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 J3KRW8 73 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 IGLV2-11P01706 119 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 SLC25A5P05141 298 aaKnown RBP9.33□□□□□ -0.92
TRAF4-214ENST00000580073 AZU1P20160 251 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 GFI1BQ5VTD9 330 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 GOLT1AQ6ZVE7 132 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 Q9H8V8 135 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
TRAF4-214ENST00000580073 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
TRAF4-214ENST00000580073 TRAV1-1A0A0B4J248 108 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 PAGE4O60829 102 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 TCRAP04437 139 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 CSN1S1P47710 185 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 RXFP4Q8TDU9 374 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 LINC00479Q96M42 142 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 ODF3Q96PU9 254 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
TRAF4-214ENST00000580073 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 KLLNB2CW77 178 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 CRISP2P16562 243 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 LEPP41159 167 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 RAB5CP51148 216 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 ZNF138P52744 262 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 BTN1A1Q13410 526 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 OR5I1Q13606 314 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 EIF5AL1Q6IS14 154 aaKnown RBP9.31□□□□□ -0.92
TRAF4-214ENST00000580073 SPATA12Q7Z6I5 190 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
TRAF4-214ENST00000580073 C5orf17Q8NAS9 161 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms