RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 GAGE12BA1L429 117 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 CD5LO43866 347 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 GAGE7O76087 117 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 SLAQ13239 276 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 KIR3DS1Q14943 382 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 PRSS57Q6UWY2 283 aa11.96□□□□□ -0.49
ITGB4-206ENST00000579662 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.5
ITGB4-206ENST00000579662 COL6A6A6NMZ7 2263 aa11.96□□□□□ -0.5
ITGB4-206ENST00000579662 IGHV3-16A0A0C4DH30 117 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 HOXD3P31249 432 aaPredicted RBP11.95□□□□□ -0.5
ITGB4-206ENST00000579662 SMIM2Q9BVW6 85 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 CFHR3Q02985 330 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 FBXL19-AS1Q494R0 122 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 SEM1Q6ZVN7 128 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 IGHV4-30-2A0A087WSY4 118 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 IGHV7-81A0A0B4J1V7 117 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 IGFBPL1Q8WX77 278 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 I3L2K1 104 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 LGALS9BQ3B8N2 356 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 LGALS9CQ6DKI2 356 aa11.95□□□□□ -0.5
ITGB4-206ENST00000579662 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
ITGB4-206ENST00000579662 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
ITGB4-206ENST00000579662 STPG4Q8N801 248 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 SIGLEC8Q9NYZ4 499 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 POLR3KQ9Y2Y1 108 aaPredicted RBP11.93□□□□□ -0.5
ITGB4-206ENST00000579662 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
ITGB4-206ENST00000579662 TRAV26-2A0A0B4J265 109 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 F8WEM9 126 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 DYNAPQ8N1N2 210 aa11.93□□□□□ -0.5
ITGB4-206ENST00000579662 C2orf16Q68DN1 1984 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 K7EMI3 77 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 CCL24O00175 119 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 LAMTOR3Q9UHA4 124 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 IGHV4-38-2P0DP08 117 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 SIGMAR1Q99720 223 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 NPYP01303 97 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
ITGB4-206ENST00000579662 K7EIM0 57 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 HLA-DRB4P13762 266 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 RMI2Q96E14 147 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 HLA-DRB4X5D2U9 266 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 DIDO1Q9BTC0 2240 aaKnown RBP11.91□□□□□ -0.5
ITGB4-206ENST00000579662 INS-IGF2F8WCM5 200 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 K7EN84 100 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 C17orf77Q96MU5 243 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
ITGB4-206ENST00000579662 KLF12Q9Y4X4 402 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 DOCK9Q9BZ29 2069 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 A0A1B0GUS0 222 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 DLEU1O43261 78 aa11.91□□□□□ -0.5
ITGB4-206ENST00000579662 GP9P14770 177 aa11.9□□□□□ -0.5
ITGB4-206ENST00000579662 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
ITGB4-206ENST00000579662 RHOHQ15669 191 aa11.9□□□□□ -0.5
ITGB4-206ENST00000579662 NAA38Q9BRA0 125 aaKnown RBP11.9□□□□□ -0.5
ITGB4-206ENST00000579662 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
ITGB4-206ENST00000579662 C5orf56Q8N8D9 126 aa11.89□□□□□ -0.51
ITGB4-206ENST00000579662 COL4A3Q01955 1670 aa11.89□□□□□ -0.51
ITGB4-206ENST00000579662 SPTBN1Q01082 2364 aaKnown RBP11.89□□□□□ -0.51
ITGB4-206ENST00000579662 HERVK_113P63121 156 aa11.89□□□□□ -0.51
ITGB4-206ENST00000579662 TMEM89A2RUT3 159 aa11.89□□□□□ -0.51
ITGB4-206ENST00000579662 GAGE6Q13070 117 aa11.89□□□□□ -0.51
ITGB4-206ENST00000579662 PKDREJQ9NTG1 2253 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 C9orf66Q5T8R8 295 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 Q8N9W7 124 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 ROS1P08922 2347 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 F8VRH5 84 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 Q6ZWC4 215 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 CFHR4Q92496 578 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 AKAP6Q13023 2319 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
ITGB4-206ENST00000579662 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
ITGB4-206ENST00000579662 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
ITGB4-206ENST00000579662 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 PRO3102Q9H379 93 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 IGLV1-47P01700 117 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 OBSL1O75147 1896 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 CTSGP08311 255 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 C16orf54Q6UWD8 224 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 RITA1Q96K30 269 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 ZNF106Q9H2Y7 1883 aaKnown RBP11.87□□□□□ -0.51
ITGB4-206ENST00000579662 USF3Q68DE3 2245 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 CRYGCP07315 174 aa11.87□□□□□ -0.51
ITGB4-206ENST00000579662 IGKV1-17P01599 117 aa11.86□□□□□ -0.51
ITGB4-206ENST00000579662 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
ITGB4-206ENST00000579662 COX8AP10176 69 aa11.86□□□□□ -0.51
ITGB4-206ENST00000579662 AJUBAQ96IF1 538 aa11.86□□□□□ -0.51
ITGB4-206ENST00000579662 F6UB75 175 aa11.86□□□□□ -0.51
ITGB4-206ENST00000579662 Q8NA96 180 aa11.86□□□□□ -0.51
ITGB4-206ENST00000579662 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms