RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 HBG2P69892 147 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 CD300CQ08708 224 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 BTN1A1Q13410 526 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 STX12Q86Y82 276 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 C10orf126Q8N4M7 172 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 TMEM252Q8N6L7 170 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 C11orf72Q8NBR9 251 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 BLNKQ8WV28 456 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 AGPAT4-IT1Q9H0P7 198 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 C11orf1Q9H5F2 150 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 LYRM2Q9NU23 88 aaPredicted RBP8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 PRO0255Q9UI72 69 aa8.75□□□□□ -1.01
CDK5RAP3-213ENST00000579605 IGSF23A1L1A6 192 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 LECT2O14960 151 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 MPDU1O75352 247 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 GPX1P07203 203 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 PYYP10082 97 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 CRYBA4P53673 196 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 TCL1AP56279 114 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 PDE6HQ13956 83 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 WFDC2Q14508 124 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 ATP6V1FQ16864 119 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 EXOC3-AS1Q8N2X6 119 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 FAM19A4Q96LR4 140 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 AAMDCQ9H7C9 122 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
CDK5RAP3-213ENST00000579605 RGS13O14921 159 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 SPINK4O60575 86 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 NDUFB4O95168 129 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 SRIP30626 198 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 RAB32Q13637 225 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 TMEM78Q5T7P6 136 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 CHAC1Q9BUX1 264 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 GPN1Q9HCN4 374 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 NUDT15Q9NV35 164 aa8.73□□□□□ -1.01
CDK5RAP3-213ENST00000579605 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 GYPEP15421 78 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 CRISP2P16562 243 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 FAM122CQ6P4D5 195 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 CIRBP-AS1Q8TBR5 109 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 ARPC5LQ9BPX5 153 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 TNXBP22105 4242 aa8.72□□□□□ -1.01
CDK5RAP3-213ENST00000579605 K7EQD1 137 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 NMBP08949 121 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 SLAQ13239 276 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 FHL2Q14192 279 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 GCSAMLQ5JQS6 135 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 ST6GAL2Q96JF0 529 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 VGLL1Q99990 258 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 NPCDR1Q9BY65 106 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 TP53TG3Q9ULZ0 132 aa8.71□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IGHV1OR15-1A0A075B7D0 117 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IL15RAQ13261 267 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 ZFAND2AQ8N6M9 145 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 PCNPQ8WW12 178 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 DAZAP1Q96EP5 407 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 OR51M1Q9H341 326 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 ZNF492Q9P255 531 aa8.7□□□□□ -1.02
CDK5RAP3-213ENST00000579605 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 FAM240BA0A1B0GVZ2 78 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 NBEAP1P0C6P0 100 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 ZNF138P52744 262 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 PRR9Q5T870 116 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 THAP6Q8TBB0 222 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 MRPL32Q9BYC8 188 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 SLC25A31Q9H0C2 315 aa8.69□□□□□ -1.02
CDK5RAP3-213ENST00000579605 GAS8-AS1O95177 125 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 CSN1S1P47710 185 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 NHLH2Q02577 135 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 Q6ZQT7 251 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 OR5C1Q8NGR4 320 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 CCDC32Q9BV29 185 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 KCNIP2Q9NS61 270 aa8.68□□□□□ -1.02
CDK5RAP3-213ENST00000579605 TRBV7-9A0A0J9YWB2 115 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 OR10J4P0C629 311 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IGHV3-30-3P0DP02 117 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 ACOT6Q3I5F7 207 aaPredicted RBP8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 MUC21Q5SSG8 566 aa8.67□□□□□ -1.02
CDK5RAP3-213ENST00000579605 MZT2BQ6NZ67 158 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms