RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 OR4B1Q8NGF8 309 aa7.64□□□□□ -1.19
SS18-210ENST00000578700 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
SS18-210ENST00000578700 NUDT11Q96G61 164 aa7.64□□□□□ -1.19
SS18-210ENST00000578700 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
SS18-210ENST00000578700 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
SS18-210ENST00000578700 IGKV2-40A0A087WW87 121 aaPredicted RBP7.63□□□□□ -1.19
SS18-210ENST00000578700 XKRY2A2RUG3 117 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 A8MWL6 223 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 SAP30O75446 220 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 IGKV2D-40P01614 121 aaPredicted RBP7.63□□□□□ -1.19
SS18-210ENST00000578700 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 S100A6P06703 90 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 CXCL1P09341 107 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 SNRPD3P62318 126 aaKnown RBP7.63□□□□□ -1.19
SS18-210ENST00000578700 KLF5Q13887 457 aaPredicted RBP7.63□□□□□ -1.19
SS18-210ENST00000578700 COX19Q49B96 90 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 CT83Q5H943 113 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 IGFL4Q6B9Z1 124 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 RNF182Q8N6D2 247 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 PYGO2Q9BRQ0 406 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 RPP21Q9H633 154 aaKnown RBP7.63□□□□□ -1.19
SS18-210ENST00000578700 SRD5A3Q9H8P0 318 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 V9GYV3 84 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
SS18-210ENST00000578700 FRAS1Q86XX4 4008 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 IGKV3-7A0A075B6H7 116 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 TMEM213A2RRL7 107 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 ZNF705FA8MVS1 300 aaPredicted RBP7.62□□□□□ -1.19
SS18-210ENST00000578700 CBLN1P23435 193 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 INSL3P51460 131 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 ZNF138P52744 262 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 SMUG1Q53HV7 270 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
SS18-210ENST00000578700 TRAV8-2A0A0B4J237 113 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 C2orf70A6NJV1 201 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 TYMSP04818 313 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 HLA-DMBP28068 263 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 SLURP1P55000 103 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 FAM162BQ5T6X4 162 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 WDR73Q6P4I2 378 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 RBPMS2Q6ZRY4 209 aaKnown RBP7.61□□□□□ -1.19
SS18-210ENST00000578700 OR9G4Q8NGQ1 327 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 DYNLRB2Q8TF09 96 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 TSKUQ8WUA8 353 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 BORCS7Q96B45 105 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 ZC2HC1AQ96GY0 325 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 LINC00477Q96M19 166 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 GFRA4Q9GZZ7 299 aa7.61□□□□□ -1.19
SS18-210ENST00000578700 SAV1Q9H4B6 383 aaPredicted RBP7.61□□□□□ -1.19
SS18-210ENST00000578700 SMIM27A0A1W2PRY6 76 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 C19orf71A6NCJ1 209 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 FAM231BA6NCW3 169 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 TCL1AP56279 114 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 RPS20P60866 119 aaKnown RBP7.6□□□□□ -1.19
SS18-210ENST00000578700 FHL3Q13643 280 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 C9orf47Q6ZRZ4 202 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 OR2D3Q8NGH3 330 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 VGLL1Q99990 258 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 MS4A6AQ9H2W1 248 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 PPP1R14DQ9NXH3 145 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
SS18-210ENST00000578700 TMEM189A5PLL7 270 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 IZUMO1RA6ND01 250 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 FABP5P3A8MUU1 101 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 SOCS3O14543 225 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 MT-ND6P03923 174 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 TRGC2P03986 189 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 TFPI2P48307 235 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 HIST1H1AQ02539 215 aaPredicted RBP7.59□□□□□ -1.19
SS18-210ENST00000578700 ERCC8Q13216 396 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 Q6AWC8 147 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 EBLN2Q6P2I7 272 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 WFDC3Q8IUB2 231 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 ZFP82Q8N141 532 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 Q8TAT8 98 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 FRZBQ92765 325 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 DLX4Q92988 240 aaPredicted RBP7.59□□□□□ -1.19
SS18-210ENST00000578700 TRAPPC1Q9Y5R8 145 aa7.59□□□□□ -1.19
SS18-210ENST00000578700 TRAV2A0A0B4J234 112 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 PRAC2D3DTV9 90 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 NPIPB6E9PJ23 425 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 SH2D1AO60880 128 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 S100A8P05109 93 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 IGHV4-30-4P0DP06 118 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 RAB4BP61018 213 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 C8orf49Q96NF6 230 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 TM2D3Q9BRN9 247 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 AGPAT4-IT1Q9H0P7 198 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 EDA2RQ9HAV5 297 aa7.58□□□□□ -1.2
SS18-210ENST00000578700 TRBV7-9A0A0J9YWB2 115 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 OR4C46A6NHA9 309 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 HIGD1CA8MV81 97 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 DUSP14O95147 198 aaKnown RBP7.57□□□□□ -1.2
SS18-210ENST00000578700 CA1P00915 261 aaPredicted RBP7.57□□□□□ -1.2
SS18-210ENST00000578700 PSMG4Q5JS54 123 aa7.57□□□□□ -1.2
SS18-210ENST00000578700 OR8A1Q8NGG7 326 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms