RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 GNB1LQ9BYB4 327 aa10.58□□□□□ -0.72
SREBF1-217ENST00000577897 LGALS9O00182 355 aa10.57□□□□□ -0.72
SREBF1-217ENST00000577897 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
SREBF1-217ENST00000577897 S100A8P05109 93 aa10.57□□□□□ -0.72
SREBF1-217ENST00000577897 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
SREBF1-217ENST00000577897 RPL11P62913 178 aaKnown RBP10.57□□□□□ -0.72
SREBF1-217ENST00000577897 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
SREBF1-217ENST00000577897 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
SREBF1-217ENST00000577897 SGK494Q96LW2 274 aa10.57□□□□□ -0.72
SREBF1-217ENST00000577897 C5orf52A6NGY3 159 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 M0R3E3 92 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 OVOL1O14753 267 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 IGLV2-11P01706 119 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 HLA-DQA1P01909 254 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 RPLP1P05386 114 aaKnown RBP10.56□□□□□ -0.72
SREBF1-217ENST00000577897 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 NDUFA6P56556 154 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 SNRPEP62304 92 aaKnown RBP10.56□□□□□ -0.72
SREBF1-217ENST00000577897 SMUG1Q53HV7 270 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 MYOZ3Q8TDC0 251 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 EDA2RQ9HAV5 297 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
SREBF1-217ENST00000577897 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 IGHV3-66A0A0C4DH42 116 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 C19orf71A6NCJ1 209 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 UBE2CO00762 179 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 S100A2P29034 98 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-217ENST00000577897 FABP9Q0Z7S8 132 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 COX8CQ7Z4L0 72 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 RHPN1-AS1Q9BWJ2 59 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 NRN1Q9NPD7 142 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 LENEPQ9Y5L5 61 aa10.55□□□□□ -0.72
SREBF1-217ENST00000577897 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
SREBF1-217ENST00000577897 IGHV3-49A0A0A0MS15 119 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 A0A1B0GW15 77 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BKO60814 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BJP06899 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BOP23527 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BBP33778 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BDP58876 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 RAB4BP61018 213 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BCP62807 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST2H2BEQ16778 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.54□□□□□ -0.72
SREBF1-217ENST00000577897 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 RBPMS2Q6ZRY4 209 aaKnown RBP10.54□□□□□ -0.72
SREBF1-217ENST00000577897 OR2D3Q8NGH3 330 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 OR10J6PQ8NGY7 276 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BHQ93079 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BNQ99877 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 HIST1H2BMQ99879 126 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
SREBF1-217ENST00000577897 IGHV3OR16-13A0A075B7E8 117 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 IGKV2-40A0A087WW87 121 aaPredicted RBP10.53□□□□□ -0.72
SREBF1-217ENST00000577897 IGHV3-74A0A0B4J1X5 117 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 A8MWP6 167 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 SNURFLB1AK76 121 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 NPIPB6E9PJ23 425 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 IGKV2D-40P01614 121 aaPredicted RBP10.53□□□□□ -0.72
SREBF1-217ENST00000577897 APOHP02749 345 aaPredicted RBP10.53□□□□□ -0.72
SREBF1-217ENST00000577897 AKR1D1P51857 326 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 ZNF138P52744 262 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 TCL1AP56279 114 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 LCNL1Q6ZST4 164 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 PPP1R14DQ9NXH3 145 aa10.53□□□□□ -0.72
SREBF1-217ENST00000577897 TMEM189A5PLL7 270 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 HOXA5P20719 270 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 RIGQ13278 110 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 TCF24Q7RTU0 167 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 NEU1Q99519 415 aa10.52□□□□□ -0.73
SREBF1-217ENST00000577897 MRPL18Q9H0U6 180 aaKnown RBP10.52□□□□□ -0.73
SREBF1-217ENST00000577897 LINC01619G3V211 115 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
SREBF1-217ENST00000577897 TM4SF20Q53R12 229 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 NUP35Q8NFH5 326 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 SORL1Q92673 2214 aa10.51□□□□□ -0.73
SREBF1-217ENST00000577897 TRBV7-9A0A0J9YWB2 115 aa10.5□□□□□ -0.73
SREBF1-217ENST00000577897 APCSP02743 223 aa10.5□□□□□ -0.73
SREBF1-217ENST00000577897 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-217ENST00000577897 HBBP68871 147 aa10.5□□□□□ -0.73
SREBF1-217ENST00000577897 HIST1H1AQ02539 215 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-217ENST00000577897 MRPL54Q6P161 138 aaKnown RBP10.5□□□□□ -0.73
SREBF1-217ENST00000577897 ZNF705FA8MVS1 300 aaPredicted RBP10.49□□□□□ -0.73
SREBF1-217ENST00000577897 CA1P00915 261 aaPredicted RBP10.49□□□□□ -0.73
SREBF1-217ENST00000577897 CBLN1P23435 193 aa10.49□□□□□ -0.73
SREBF1-217ENST00000577897 RNF182Q8N6D2 247 aa10.49□□□□□ -0.73
SREBF1-217ENST00000577897 VGLL1Q99990 258 aa10.49□□□□□ -0.73
SREBF1-217ENST00000577897 IGHV4OR15-8A0A075B7B6 117 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms