RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 GPN1Q9HCN4 374 aaPredicted RBP7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 BOLA1Q9Y3E2 137 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 IGHV3-38A0A0C4DH36 116 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 KRTAP29-1A8MX34 341 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 C1QBP02746 253 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 PVALBP20472 110 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 ZNF138P52744 262 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 VWC2Q2TAL6 325 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 SPANXN2Q5MJ10 180 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 Q6ZQT7 251 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 RASL10AQ92737 203 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 SPXQ9BT56 116 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 SLC25A31Q9H0C2 315 aa7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 LSM5Q9Y4Y9 91 aaKnown RBP7.81□□□□□ -1.16
CTDNEP1-212ENST00000576613 CENPXA8MT69 81 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 S100A11P31949 105 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 PPT1P50897 306 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 HBG1P69891 147 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 HBG2P69892 147 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 LINC01556Q5JQF7 62 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 MUC21Q5SSG8 566 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 STX12Q86Y82 276 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 NHLRC2Q8NBF2 726 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 Q8TAT8 98 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 DEFB104AQ8WTQ1 72 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 CHAC2Q8WUX2 184 aa7.8□□□□□ -1.16
CTDNEP1-212ENST00000576613 TRGV11A0A075B6L2 103 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 TRAV8-6A0A0B4J262 113 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 IBA57-AS1B1ANH7 110 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 CCSO14618 274 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 FGF7P21781 194 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 SULT1A1P50225 295 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 TIRAPP58753 221 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 ZNF266Q14584 549 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 CNPY1Q3B7I2 92 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 FAM159AQ6UWV7 190 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 SYT8Q8NBV8 401 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 OR4C5Q8NGB2 326 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 Q9HAA7 133 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 FAM30AQ9NZY2 134 aa7.79□□□□□ -1.16
CTDNEP1-212ENST00000576613 FAM24AA6NFZ4 105 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 FAM25EA8MYX2 175 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 NBEAP1P0C6P0 100 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 CSN1S1P47710 185 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 TMEM183BQ1AE95 376 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 TMEM183AQ8IXX5 376 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 SLC25A2Q9BXI2 301 aa7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 LYRM2Q9NU23 88 aaPredicted RBP7.78□□□□□ -1.16
CTDNEP1-212ENST00000576613 RBAKDNA6NC62 111 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 C5orf51A6NDU8 294 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 BAK1Q16611 211 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 ATP6V1FQ16864 119 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 GCSAMLQ5JQS6 135 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 Q6AWC8 147 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 TM2D2Q9BX73 214 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 NPCDR1Q9BY65 106 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
CTDNEP1-212ENST00000576613 LOC100131303A0A0U1RQF7 123 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 M0R2P5 195 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 PFN1P07737 140 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 BTCP35070 178 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 S100A10P60903 97 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 LAGE3Q14657 143 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 Q6ZSA8 131 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 TMEM252Q8N6L7 170 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 FAM167A-AS1Q96KT0 104 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 C11orf1Q9H5F2 150 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 NAGKQ9UJ70 344 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 LENEPQ9Y5L5 61 aa7.76□□□□□ -1.17
CTDNEP1-212ENST00000576613 IGSF23A1L1A6 192 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 CCDC160A6NGH7 325 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 OR10J4P0C629 311 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 TDRG1Q3Y452 100 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 MIR17HGQ75NE6 70 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 FXYD5Q96DB9 178 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 PHYHIPLQ96FC7 376 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 C2orf50Q96LR7 162 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 PAXXQ9BUH6 204 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 KCNIP2Q9NS61 270 aa7.75□□□□□ -1.17
CTDNEP1-212ENST00000576613 OR7C2O60412 319 aa7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 IGHV3-30P01768 117 aa7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 IGHV3-33P01772 117 aa7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 IGHV3-30-3P0DP02 117 aa7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 IGHV3-30-5P0DP03 117 aa7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 GATA1P15976 413 aaPredicted RBP7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 RANP62826 216 aaKnown RBP7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 PRADC1Q9BSG0 188 aa7.74□□□□□ -1.17
CTDNEP1-212ENST00000576613 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 RAB32Q13637 225 aa7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 RHOHQ15669 191 aa7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 LELP1Q5T871 98 aa7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 THAP6Q8TBB0 222 aa7.73□□□□□ -1.17
CTDNEP1-212ENST00000576613 TMED6Q8WW62 240 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms