RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TMEM250H0YL14 139 aa9.56□□□□□ -0.88
RPAIN-216ENST00000575599 INSP01308 110 aa9.56□□□□□ -0.88
RPAIN-216ENST00000575599 AKR1C3P42330 323 aa9.56□□□□□ -0.88
RPAIN-216ENST00000575599 SRSF3P84103 164 aaKnown RBP9.56□□□□□ -0.88
RPAIN-216ENST00000575599 CEMP1Q6PRD7 247 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-216ENST00000575599 PHLDA1Q8WV24 401 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-216ENST00000575599 MRPL53Q96EL3 112 aaKnown RBP9.56□□□□□ -0.88
RPAIN-216ENST00000575599 TMEM208Q9BTX3 173 aa9.56□□□□□ -0.88
RPAIN-216ENST00000575599 DYNC2H1Q8NCM8 4307 aaKnown RBP9.56□□□□□ -0.88
RPAIN-216ENST00000575599 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 LCE6AA0A183 80 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 SCO2A0A1W2PP80 73 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 PEX7O00628 323 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 NDUFS6O75380 124 aaKnown RBP9.55□□□□□ -0.88
RPAIN-216ENST00000575599 AMBPP02760 352 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
RPAIN-216ENST00000575599 EMP1P54849 157 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 UBE2G1P62253 170 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 GNG5P63218 68 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 ZNF674Q2M3X9 581 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 OR10J6PQ8NGY7 276 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 IGF2BP2-AS1Q96M15 143 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 ATG101Q9BSB4 218 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 CELA1Q9UNI1 258 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
RPAIN-216ENST00000575599 SERTM2A0A1B0GWG4 89 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 M0R3E3 92 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 CRXO43186 299 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-216ENST00000575599 TCRAP04437 139 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 SFTA3P0C7M3 94 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 SOHLH1Q5JUK2 328 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 NEU1Q99519 415 aa9.54□□□□□ -0.88
RPAIN-216ENST00000575599 KLK5Q9Y337 293 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-216ENST00000575599 PLECQ15149 4684 aaKnown RBP9.53□□□□□ -0.88
RPAIN-216ENST00000575599 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
RPAIN-216ENST00000575599 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
RPAIN-216ENST00000575599 F8W036 122 aa9.53□□□□□ -0.88
RPAIN-216ENST00000575599 S100A9P06702 114 aaKnown RBP9.53□□□□□ -0.88
RPAIN-216ENST00000575599 RYR2Q92736 4967 aa9.53□□□□□ -0.88
RPAIN-216ENST00000575599 LYSTQ99698 3801 aa9.53□□□□□ -0.88
RPAIN-216ENST00000575599 TMEM218A2RU14 115 aa9.52□□□□□ -0.88
RPAIN-216ENST00000575599 ZNF727A8MUV8 499 aa9.52□□□□□ -0.88
RPAIN-216ENST00000575599 RRN3P1Q2M238 152 aa9.52□□□□□ -0.88
RPAIN-216ENST00000575599 Q6ZTC4 211 aa9.52□□□□□ -0.88
RPAIN-216ENST00000575599 C11orf52Q96A22 123 aa9.52□□□□□ -0.88
RPAIN-216ENST00000575599 TMEM189A5PLL7 270 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 FBLL1A6NHQ2 334 aaKnown RBP9.51□□□□□ -0.89
RPAIN-216ENST00000575599 C9JQL5 133 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 J3KRW8 73 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 CDKN1BP46527 198 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 FAM74A3Q4VXF1 159 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 TMEM78Q5T7P6 136 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 FMC1Q96HJ9 113 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 SMIM7Q9BQ49 75 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 PARLQ9H300 379 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 TENM2Q9NT68 2774 aa9.51□□□□□ -0.89
RPAIN-216ENST00000575599 IGKV2-40A0A087WW87 121 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-216ENST00000575599 RBAKDNA6NC62 111 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-216ENST00000575599 KRBOX1C9JBD0 128 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 NPIPB6E9PJ23 425 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 IGKV2D-40P01614 121 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-216ENST00000575599 PRM2P04554 102 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 RPL35P42766 123 aaKnown RBP9.5□□□□□ -0.89
RPAIN-216ENST00000575599 GNG4P50150 75 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 TAS2R60P59551 318 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 TMEM75Q8N9X5 138 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 LINC01587Q99440 93 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 TRAV34A0A0B4J273 112 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 SPART-AS1P0CW21 52 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 CT45A10P0DMU9 189 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 HTN1P15515 57 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 TSPOP30536 169 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 FLI1Q01543 452 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-216ENST00000575599 ERCC8Q13216 396 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 KIR3DS1Q14943 382 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 C12orf74Q32Q52 190 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 PRNTQ86SH4 94 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 C2CD4CQ8TF44 421 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 LINC00479Q96M42 142 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 NIPSNAP3BQ9BS92 247 aa9.5□□□□□ -0.89
RPAIN-216ENST00000575599 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 TRAV10A0A0B4J240 114 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 LEPP41159 167 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 BAGE2Q86Y30 109 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 LINC00477Q96M19 166 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 DERL1Q9BUN8 251 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 SEC11CQ9BY50 192 aa9.49□□□□□ -0.89
RPAIN-216ENST00000575599 DKK2Q9UBU2 259 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms