RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TAAR5O14804 337 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 BCL2L11O43521 198 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 SPINK4O60575 86 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 TCRAP04437 139 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
SMG6-216ENST00000575176 DAD1P61803 113 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 TDRG1Q3Y452 100 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 IBA57Q5T440 356 aaKnown RBP6.06□□□□□ -1.44
SMG6-216ENST00000575176 TMEM78Q5T7P6 136 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 GOLT1AQ6ZVE7 132 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 ZNF575Q86XF7 245 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 CCDC28AQ8IWP9 274 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 TCTE3Q8IZS6 198 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 FAM210BQ96KR6 192 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 GSN-AS1Q9NRJ2 163 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 KLF12Q9Y4X4 402 aa6.06□□□□□ -1.44
SMG6-216ENST00000575176 TIMM8BQ9Y5J9 83 aaPredicted RBP6.06□□□□□ -1.44
SMG6-216ENST00000575176 IGHV1OR15-1A0A075B7D0 117 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 A0A1W2PPV4 95 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 FAM74A7A6NL05 159 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 F6UZH7 168 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 CXorf1O96002 111 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 MBP02144 154 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 RNASE4P34096 147 aaKnown RBP6.05□□□□□ -1.44
SMG6-216ENST00000575176 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
SMG6-216ENST00000575176 EIF4E3Q8N5X7 224 aaKnown RBP6.05□□□□□ -1.44
SMG6-216ENST00000575176 C5orf17Q8NAS9 161 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 STOML3Q8TAV4 291 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 ARPC5LQ9BPX5 153 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 NDUFAF3Q9BU61 184 aa6.05□□□□□ -1.44
SMG6-216ENST00000575176 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
SMG6-216ENST00000575176 BORCS7-ASMTA0A0B4J1R7 106 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 A0A1W2PRE2 83 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 CBY3A6NI87 242 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 GPX1P07203 203 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 HTN1P15515 57 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 Q6ZR54 194 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 POM121L12Q8N7R1 296 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 ZNF680Q8NEM1 530 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 RXFP4Q8TDU9 374 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 VSIG2Q96IQ7 327 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 SGK494Q96LW2 274 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 HYLS1Q96M11 299 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 LINC00479Q96M42 142 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 C8orf49Q96NF6 230 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 ACTR3CQ9C0K3 210 aaPredicted RBP6.04□□□□□ -1.44
SMG6-216ENST00000575176 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
SMG6-216ENST00000575176 RYR1P21817 5038 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 MAP1LC3B2A6NCE7 125 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 TYMSP04818 313 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 ATP5G1P05496 136 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 HTN3P15516 51 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 ATP5G3P48201 142 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 LGALSLQ3ZCW2 172 aaPredicted RBP6.03□□□□□ -1.44
SMG6-216ENST00000575176 MUC21Q5SSG8 566 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 COX8CQ7Z4L0 72 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 Q86TA4 180 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 ATG101Q9BSB4 218 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 MAP1LC3BQ9GZQ8 125 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 TMEM167BQ9NRX6 74 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 EPDR1Q9UM22 224 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 RPH3ALQ9UNE2 315 aa6.03□□□□□ -1.44
SMG6-216ENST00000575176 IGHV3-16A0A0C4DH30 117 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 A0A0D9SG52 128 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 A0A1B0GVG6 124 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 SERTM2A0A1B0GWG4 89 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 GAGE12BA1L429 117 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 GAGE7O76087 117 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 C1QBP02746 253 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 GAGE12FP0CL80 117 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 GAGE12GP0CL81 117 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 GAGE12IP0CL82 117 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 CSN1S1P47710 185 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 SUMO1P63165 101 aaKnown RBP6.02□□□□□ -1.45
SMG6-216ENST00000575176 TMUB2Q71RG4 321 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 CYB561D1Q8N8Q1 229 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 MBD3L1Q8WWY6 194 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 MRPL16Q9NX20 251 aaKnown RBP6.02□□□□□ -1.45
SMG6-216ENST00000575176 PSG8Q9UQ74 426 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
SMG6-216ENST00000575176 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 SNURFLB1AK76 121 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 PEX7O00628 323 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 RTL8CO15255 209 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 P0DMU3 169 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 FAM231AP0DMU4 169 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 FAM231CP0DMU5 169 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 CRIP1P50238 77 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 UBE2G2P60604 165 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 FLI1Q01543 452 aaPredicted RBP6.01□□□□□ -1.45
SMG6-216ENST00000575176 LGALS9BQ3B8N2 356 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 C9orf62Q8N4C0 152 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 C15orf53Q8NAA6 179 aa6.01□□□□□ -1.45
SMG6-216ENST00000575176 ZNRF2Q8NHG8 242 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms