RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 OR11H1Q8NG94 326 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 CNFNQ9BYD5 112 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
SMG6-215ENST00000574501 ATMQ13315 3056 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 IGHG4P01861 327 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 CARD19Q96LW7 228 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 PSMG3-AS1Q96PY0 264 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 FABP5P3A8MUU1 101 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
SMG6-215ENST00000574501 COX7A1P24310 79 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 CEP250Q9BV73 2442 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 MBD3L4A6NDZ8 208 aaPredicted RBP11.16□□□□□ -0.62
SMG6-215ENST00000574501 MBD3L3A6NE82 208 aaPredicted RBP11.16□□□□□ -0.62
SMG6-215ENST00000574501 MBD3L5A6NJ08 208 aaPredicted RBP11.16□□□□□ -0.62
SMG6-215ENST00000574501 MBD3L2Q8NHZ7 208 aaPredicted RBP11.16□□□□□ -0.62
SMG6-215ENST00000574501 CFHR4Q92496 578 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 OTOGLQ3ZCN5 2332 aa11.16□□□□□ -0.62
SMG6-215ENST00000574501 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.62
SMG6-215ENST00000574501 PRSS29PA6NIE9 313 aa11.15□□□□□ -0.62
SMG6-215ENST00000574501 TGFAP01135 160 aa11.15□□□□□ -0.62
SMG6-215ENST00000574501 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
SMG6-215ENST00000574501 NRACQ8N912 160 aa11.15□□□□□ -0.62
SMG6-215ENST00000574501 SMAD5-AS1Q9Y6J3 95 aa11.15□□□□□ -0.62
SMG6-215ENST00000574501 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.63
SMG6-215ENST00000574501 PRAC2D3DTV9 90 aa11.15□□□□□ -0.63
SMG6-215ENST00000574501 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.63
SMG6-215ENST00000574501 H7C1H1 209 aa11.15□□□□□ -0.63
SMG6-215ENST00000574501 ADIPOQQ15848 244 aa11.15□□□□□ -0.63
SMG6-215ENST00000574501 F8VRH5 84 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 ANAPC13Q9BS18 74 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 ZGRF1Q86YA3 2104 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
SMG6-215ENST00000574501 TRAV17A0A0B4J275 112 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
SMG6-215ENST00000574501 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 RAXQ9Y2V3 346 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 MGAQ8IWI9 3026 aa11.14□□□□□ -0.63
SMG6-215ENST00000574501 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 H3BVH4 76 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMG6-215ENST00000574501 SCGB1D4Q6XE38 83 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 VKORC1Q9BQB6 163 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 FAM215AQ9Y5M1 114 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
SMG6-215ENST00000574501 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
SMG6-215ENST00000574501 ZNF815PA8K554 130 aa11.12□□□□□ -0.63
SMG6-215ENST00000574501 TCF15Q12870 199 aa11.12□□□□□ -0.63
SMG6-215ENST00000574501 C3orf36Q3SXR2 165 aa11.12□□□□□ -0.63
SMG6-215ENST00000574501 Q6ZQT7 251 aa11.12□□□□□ -0.63
SMG6-215ENST00000574501 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
SMG6-215ENST00000574501 PRADC1Q9BSG0 188 aa11.12□□□□□ -0.63
SMG6-215ENST00000574501 F8W735 103 aaPredicted RBP11.11□□□□□ -0.63
SMG6-215ENST00000574501 Q6ZS92 163 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 RAB1BQ9H0U4 201 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 RALYQ9UKM9 306 aaKnown RBP11.11□□□□□ -0.63
SMG6-215ENST00000574501 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 LINC01619G3V211 115 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 MFAP4P55083 255 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 SRSF2Q01130 221 aaKnown RBP11.11□□□□□ -0.63
SMG6-215ENST00000574501 TEN1Q86WV5 123 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 SCGB3A1Q96QR1 104 aa11.11□□□□□ -0.63
SMG6-215ENST00000574501 SRSF8Q9BRL6 282 aaKnown RBP11.11□□□□□ -0.63
SMG6-215ENST00000574501 B5MCH6 92 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 TIMM23O14925 209 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 TCL1BO95988 128 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 ASCL5Q7RTU5 278 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 CD59P13987 128 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 LRBAP50851 2863 aa11.1□□□□□ -0.63
SMG6-215ENST00000574501 WNK2Q9Y3S1 2297 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 A6NJY4 79 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 SLC25A16P16260 332 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 UBE2D1P51668 147 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 UBE2D3P61077 147 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 UBE2D2P62837 147 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 ONECUT1Q9UBC0 465 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 RELNP78509 3460 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 DCHS2Q6V1P9 2916 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 ZNF292O60281 2723 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 TRAV12-1A0A0B4J245 112 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 SPRY2O43597 315 aa11.09□□□□□ -0.63
SMG6-215ENST00000574501 ZNF688P0C7X2 276 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms