RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 PRR9Q5T870 116 aa12.35□□□□□ -0.43
CLDN7-207ENST00000574070 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
CLDN7-207ENST00000574070 SLC51BQ86UW2 128 aa12.35□□□□□ -0.43
CLDN7-207ENST00000574070 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
CLDN7-207ENST00000574070 C2CD4CQ8TF44 421 aa12.35□□□□□ -0.43
CLDN7-207ENST00000574070 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
CLDN7-207ENST00000574070 EPDR1Q9UM22 224 aa12.35□□□□□ -0.43
CLDN7-207ENST00000574070 CBY3A6NI87 242 aa12.34□□□□□ -0.43
CLDN7-207ENST00000574070 RGS13O14921 159 aa12.34□□□□□ -0.43
CLDN7-207ENST00000574070 DAD1P61803 113 aa12.34□□□□□ -0.43
CLDN7-207ENST00000574070 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
CLDN7-207ENST00000574070 NDFIP1Q9BT67 221 aa12.34□□□□□ -0.43
CLDN7-207ENST00000574070 LENEPQ9Y5L5 61 aa12.34□□□□□ -0.43
CLDN7-207ENST00000574070 FAM74A7A6NL05 159 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 LYRM9A8MSI8 78 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 H2AFB1P0C5Y9 115 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 CST9LP1Q5W188 147 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 C9orf62Q8N4C0 152 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 NKX6-2Q9C056 277 aaPredicted RBP12.33□□□□□ -0.44
CLDN7-207ENST00000574070 TREM1Q9NP99 234 aa12.33□□□□□ -0.44
CLDN7-207ENST00000574070 DEFB131BA0A096LNP1 70 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 IGLL5B9A064 214 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
CLDN7-207ENST00000574070 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 HTN3P15516 51 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 PRNTQ86SH4 94 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 EIF4E3Q8N5X7 224 aaKnown RBP12.32□□□□□ -0.44
CLDN7-207ENST00000574070 RNASE8Q8TDE3 154 aaKnown RBP12.32□□□□□ -0.44
CLDN7-207ENST00000574070 ATG101Q9BSB4 218 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
CLDN7-207ENST00000574070 PSG8Q9UQ74 426 aa12.32□□□□□ -0.44
CLDN7-207ENST00000574070 TIMM8BQ9Y5J9 83 aaPredicted RBP12.32□□□□□ -0.44
CLDN7-207ENST00000574070 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
CLDN7-207ENST00000574070 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
CLDN7-207ENST00000574070 F6UZH7 168 aa12.31□□□□□ -0.44
CLDN7-207ENST00000574070 PPT1P50897 306 aa12.31□□□□□ -0.44
CLDN7-207ENST00000574070 RAB5CP51148 216 aa12.31□□□□□ -0.44
CLDN7-207ENST00000574070 PEX7O00628 323 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 FLI1Q01543 452 aaPredicted RBP12.3□□□□□ -0.44
CLDN7-207ENST00000574070 MUC21Q5SSG8 566 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 Q6ZQT7 251 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 ZNF680Q8NEM1 530 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 NAGKQ9UJ70 344 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 HYDINQ4G0P3 5121 aa12.3□□□□□ -0.44
CLDN7-207ENST00000574070 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
CLDN7-207ENST00000574070 TEX46H3BTG2 121 aa12.29□□□□□ -0.44
CLDN7-207ENST00000574070 PAGE4O60829 102 aa12.29□□□□□ -0.44
CLDN7-207ENST00000574070 NKX2-5P52952 324 aaPredicted RBP12.29□□□□□ -0.44
CLDN7-207ENST00000574070 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
CLDN7-207ENST00000574070 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
CLDN7-207ENST00000574070 TRAV34A0A0B4J273 112 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 TRAV21A0A0B4J279 112 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 ATP5G3P48201 142 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 SULT1A2P50226 295 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 ANXA2RQ3ZCQ2 193 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 Q6AWC8 147 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 FAM159AQ6UWV7 190 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 TVP23CQ96ET8 276 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 LINC00479Q96M42 142 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
CLDN7-207ENST00000574070 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
CLDN7-207ENST00000574070 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
CLDN7-207ENST00000574070 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
CLDN7-207ENST00000574070 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
CLDN7-207ENST00000574070 IGLV2-11P01706 119 aa12.26□□□□□ -0.45
CLDN7-207ENST00000574070 UBE2G1P62253 170 aa12.26□□□□□ -0.45
CLDN7-207ENST00000574070 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
CLDN7-207ENST00000574070 SAPCD1Q5SSQ6 148 aa12.26□□□□□ -0.45
CLDN7-207ENST00000574070 PLECQ15149 4684 aaKnown RBP12.26□□□□□ -0.45
CLDN7-207ENST00000574070 GAGE12BA1L429 117 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 GAGE7O76087 117 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 LY6G6CO95867 125 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 GCGP01275 180 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 AKR1C3P42330 323 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 TCTAP57738 103 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 GNG13Q9P2W3 67 aa12.25□□□□□ -0.45
CLDN7-207ENST00000574070 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 F5H768 121 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 ATP5G1P05496 136 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 IBA57Q5T440 356 aaKnown RBP12.24□□□□□ -0.45
CLDN7-207ENST00000574070 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 NDUFAF3Q9BU61 184 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 KLF12Q9Y4X4 402 aa12.24□□□□□ -0.45
CLDN7-207ENST00000574070 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
CLDN7-207ENST00000574070 TCL1AP56279 114 aa12.23□□□□□ -0.45
CLDN7-207ENST00000574070 CCL20P78556 96 aa12.23□□□□□ -0.45
CLDN7-207ENST00000574070 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
CLDN7-207ENST00000574070 ALKAL2Q6UX46 152 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms