RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TMEM263Q8WUH6 116 aaKnown RBP9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 TREM1Q9NP99 234 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 MANBALQ9NQG1 85 aa9.18□□□□□ -0.94
TRAPPC1-206ENST00000573989 DNAH7Q8WXX0 4024 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 PEX7O00628 323 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 PAGE4O60829 102 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 SAPCD1Q5SSQ6 148 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC1-206ENST00000573989 CBY3A6NI87 242 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 SNURFLB1AK76 121 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 ZNF324O75467 553 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 IFNA1P01562 189 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 UBE2G1P62253 170 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 BLOC1S1P78537 153 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 FAM222AQ5U5X8 452 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 Q6AWC8 147 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 PRNTQ86SH4 94 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 ZNF680Q8NEM1 530 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 TXNDC17Q9BRA2 123 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 DKK2Q9UBU2 259 aa9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 TIMM8BQ9Y5J9 83 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC1-206ENST00000573989 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 TRAV21A0A0B4J279 112 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 AZU1P20160 251 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 FAM159AQ6UWV7 190 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 ALKAL2Q6UX46 152 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 FMC1Q96HJ9 113 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 SGK494Q96LW2 274 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 GNG13Q9P2W3 67 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 CELA1Q9UNI1 258 aa9.15□□□□□ -0.94
TRAPPC1-206ENST00000573989 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 PRM2P04554 102 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 S100A9P06702 114 aaKnown RBP9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 TAGLN2P37802 199 aaKnown RBP9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 AKR1C3P42330 323 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 ATP5G3P48201 142 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 DAD1P61803 113 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 ANXA2RQ3ZCQ2 193 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 PRR9Q5T870 116 aa9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC1-206ENST00000573989 IGLV2-11P01706 119 aa9.13□□□□□ -0.95
TRAPPC1-206ENST00000573989 C12orf74Q32Q52 190 aa9.13□□□□□ -0.95
TRAPPC1-206ENST00000573989 C2CD4CQ8TF44 421 aa9.13□□□□□ -0.95
TRAPPC1-206ENST00000573989 KCNS1Q96KK3 526 aa9.13□□□□□ -0.95
TRAPPC1-206ENST00000573989 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
TRAPPC1-206ENST00000573989 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
TRAPPC1-206ENST00000573989 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 TRAV34A0A0B4J273 112 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 GCGP01275 180 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 Q6ZTC4 211 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 LINC00479Q96M42 142 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 NOP10Q9NPE3 64 aaKnown RBP9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 KLF12Q9Y4X4 402 aa9.12□□□□□ -0.95
TRAPPC1-206ENST00000573989 TRBV6-1A0A0K0K1D8 114 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 PLAC8L1A1L4L8 177 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 PFN1P07737 140 aaKnown RBP9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 TCTAP57738 103 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 CCL20P78556 96 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 DAZ2Q13117 558 aaKnown RBP9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 MUC21Q5SSG8 566 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 ZNF767PQ75MW2 155 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 Q86TA4 180 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 C8orf49Q96NF6 230 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 NAGKQ9UJ70 344 aa9.11□□□□□ -0.95
TRAPPC1-206ENST00000573989 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 DEFB131BA0A096LNP1 70 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 SCO2A0A1W2PP80 73 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 PDE6DO43924 150 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 BCL2P10415 239 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 TDRG1Q3Y452 100 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 SDF2L1Q9HCN8 221 aa9.1□□□□□ -0.95
TRAPPC1-206ENST00000573989 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 LTAP01374 205 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 TCL1AP56279 114 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 Q6ZQT7 251 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 TMEM183AQ8IXX5 376 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
TRAPPC1-206ENST00000573989 IGLL5B9A064 214 aa9.08□□□□□ -0.96
TRAPPC1-206ENST00000573989 ATP5G1P05496 136 aa9.08□□□□□ -0.96
TRAPPC1-206ENST00000573989 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
TRAPPC1-206ENST00000573989 COX8CQ7Z4L0 72 aa9.08□□□□□ -0.96
TRAPPC1-206ENST00000573989 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
TRAPPC1-206ENST00000573989 SPXQ9BT56 116 aa9.08□□□□□ -0.96
TRAPPC1-206ENST00000573989 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms