RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 PFN1P07737 140 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 APELAP0DMC3 54 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 RPL7P18124 248 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 TSPOP30536 169 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 RTL8BQ17RB0 113 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 ACOT6Q3I5F7 207 aaPredicted RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 AMMECR1LQ6DCA0 310 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 TBC1D26Q86UD7 250 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 TEX45Q8NA69 505 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 DYNLRB2Q8TF09 96 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 SRSF12Q8WXF0 261 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 OVOL2Q9BRP0 275 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 VAMP8Q9BV40 100 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 SMIM3Q9BZL3 60 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 OR2D2Q9H210 308 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 PARLQ9H300 379 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 KLK11Q9UBX7 282 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 YTHDF2Q9Y5A9 579 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
CACNA1A-203ENST00000573891 TMEM235A6NFC5 223 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 RHODO00212 210 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 GSTZ1O43708 216 aaPredicted RBP4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 HYPMO75409 117 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 PRH1P02810 166 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 TAS2R19P59542 299 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 EWSR1Q01844 656 aaKnown RBP eCLIP4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 CD164Q04900 197 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 ATP5G2Q06055 141 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 C15orf32Q32M92 178 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 VMA21Q3ZAQ7 101 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 ZNF66Q6ZN08 573 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 TMEM61Q8N0U2 210 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 OR10G7Q8NGN6 311 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 DDB2Q92466 427 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 ARHGAP5-AS1Q96IT6 56 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 GGTLC1Q9BX51 225 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 TM2D2Q9BX73 214 aa4.49□□□□□ -1.69
CACNA1A-203ENST00000573891 RYR1P21817 5038 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 LOC102724200A0A096LPH7 203 aaPredicted RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 TRBV6-7A0A0A0MS04 114 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 KANTRA0A1W2PQU2 76 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 MEIS3P1A6NDR6 274 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 C9JAW5 83 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 SLC17A2O00624 439 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 CREBL2O60519 120 aaPredicted RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 CXCL1P09341 107 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 SEC11BP0C7V7 166 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 SAA1P0DJI8 122 aaPredicted RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 CBLN1P23435 193 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 DUTP33316 252 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 LEPP41159 167 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 UBE2MP61081 183 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 Q0VG73 95 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 ICAM4Q14773 271 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 BATFQ16520 125 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 SOHLH1Q5JUK2 328 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 C10orf55Q5SWW7 151 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 AADACL3Q5VUY0 350 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 ZNF57Q68EA5 555 aaPredicted RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 CEMP1Q6PRD7 247 aaPredicted RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 CEACAM19Q7Z692 300 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 GPHB5Q86YW7 130 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 RPP25LQ8N5L8 163 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 ATP6V0E2Q8NHE4 81 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 OSR1Q8TAX0 266 aaPredicted RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 GFI1Q99684 422 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 MS4A6AQ9H2W1 248 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 TXNL4BQ9NX01 149 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 HIGD1AQ9Y241 93 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 ZNF257Q9Y2Q1 563 aa4.48□□□□□ -1.69
CACNA1A-203ENST00000573891 A0A0J9YWU9 116 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 A6NDN8 102 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 LINC00473A8K010 186 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 CHEK1O14757 476 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 DEDDO75618 318 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 OXTP01178 125 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 LINC00869P0C866 280 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 TPT1P13693 172 aaKnown RBP4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 KLK9Q2XQG4 91 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 SLC25A42Q86VD7 318 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 MMD2Q8IY49 270 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 LINC01587Q99440 93 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 NDUFB11Q9NX14 153 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 KLK9Q9UKQ9 250 aa4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 LSM2Q9Y333 95 aaKnown RBP4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 LSM5Q9Y4Y9 91 aaKnown RBP4.47□□□□□ -1.69
CACNA1A-203ENST00000573891 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 TEX48A0A1B0GUV7 120 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 C15orf61A6NNL5 157 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 C9JQL5 133 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 AGPAT2O15120 278 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 SFT2D2O95562 160 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 GPX1P07203 203 aa4.46□□□□□ -1.7
CACNA1A-203ENST00000573891 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms