RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
CHD3-215ENST00000572750 DKK2Q9UBU2 259 aa11.3□□□□□ -0.6
CHD3-215ENST00000572750 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 NMBP08949 121 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 EIF5AL1Q6IS14 154 aaKnown RBP11.29□□□□□ -0.6
CHD3-215ENST00000572750 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
CHD3-215ENST00000572750 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
CHD3-215ENST00000572750 MBD3L1Q8WWY6 194 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 ATG101Q9BSB4 218 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 EPDR1Q9UM22 224 aa11.29□□□□□ -0.6
CHD3-215ENST00000572750 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 F6UZH7 168 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
CHD3-215ENST00000572750 IFNA7P01567 189 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 CEMP1Q6PRD7 247 aaPredicted RBP11.28□□□□□ -0.6
CHD3-215ENST00000572750 TVP23CQ96ET8 276 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
CHD3-215ENST00000572750 K7EQM0 130 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 PEX7O00628 323 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 IGLV2-11P01706 119 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 ATP5G3P48201 142 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 SULT1A2P50226 295 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 CST9LP1Q5W188 147 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
CHD3-215ENST00000572750 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 TEX48A0A1B0GUV7 120 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 PAGE4O60829 102 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 RAB5CP51148 216 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 CCDC28AQ8IWP9 274 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 LINC00479Q96M42 142 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 TREM1Q9NP99 234 aa11.26□□□□□ -0.61
CHD3-215ENST00000572750 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 CBY3A6NI87 242 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 RGS13O14921 159 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 FLI1Q01543 452 aaPredicted RBP11.25□□□□□ -0.61
CHD3-215ENST00000572750 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 NDFIP1Q9BT67 221 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 NKX6-2Q9C056 277 aaPredicted RBP11.25□□□□□ -0.61
CHD3-215ENST00000572750 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 ARL2-SNX15V9GYD0 113 aa11.25□□□□□ -0.61
CHD3-215ENST00000572750 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 LYRM9A8MSI8 78 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 DAD1P61803 113 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 Q6AWC8 147 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 Q86TA4 180 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 EIF4E3Q8N5X7 224 aaKnown RBP11.24□□□□□ -0.61
CHD3-215ENST00000572750 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
CHD3-215ENST00000572750 NAGKQ9UJ70 344 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
CHD3-215ENST00000572750 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
CHD3-215ENST00000572750 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 HTN3P15516 51 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 CCL20P78556 96 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 GNG13Q9P2W3 67 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 TIMM8BQ9Y5J9 83 aaPredicted RBP11.23□□□□□ -0.61
CHD3-215ENST00000572750 KMT2AQ03164 3969 aa11.23□□□□□ -0.61
CHD3-215ENST00000572750 DEFB131BA0A096LNP1 70 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 SNURFLB1AK76 121 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 PPT1P50897 306 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 ZNF680Q8NEM1 530 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 GSN-AS1Q9NRJ2 163 aa11.22□□□□□ -0.61
CHD3-215ENST00000572750 SCO2A0A1W2PP80 73 aa11.21□□□□□ -0.61
CHD3-215ENST00000572750 IGLL5B9A064 214 aa11.21□□□□□ -0.61
CHD3-215ENST00000572750 GCGP01275 180 aa11.21□□□□□ -0.61
CHD3-215ENST00000572750 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
CHD3-215ENST00000572750 ANXA2RQ3ZCQ2 193 aa11.21□□□□□ -0.61
CHD3-215ENST00000572750 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
CHD3-215ENST00000572750 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
CHD3-215ENST00000572750 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
CHD3-215ENST00000572750 FBLL1A6NHQ2 334 aaKnown RBP11.2□□□□□ -0.62
CHD3-215ENST00000572750 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
CHD3-215ENST00000572750 AKR1C3P42330 323 aa11.2□□□□□ -0.62
CHD3-215ENST00000572750 GAGE12BA1L429 117 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 GAGE7O76087 117 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 GAGE12GP0CL81 117 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 GAGE12IP0CL82 117 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 TCL1AP56279 114 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 UBE2G1P62253 170 aa11.19□□□□□ -0.62
CHD3-215ENST00000572750 TMEM183BQ1AE95 376 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms