RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
RPAIN-211ENST00000572174 KIR3DS1Q14943 382 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 ZNF726P1Q15940 193 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 IBA57Q5T440 356 aaKnown RBP9.95□□□□□ -0.82
RPAIN-211ENST00000572174 Q6AWC8 147 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 TMEM75Q8N9X5 138 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 LINC00476Q8WZB0 136 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 IGHV1OR15-1A0A075B7D0 117 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 IFNA7P01567 189 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 ATP5G1P05496 136 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 AZU1P20160 251 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 ATP5G3P48201 142 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 FHITP49789 147 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 CD300CQ08708 224 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 SAPCD1Q5SSQ6 148 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 LGALS9CQ6DKI2 356 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 SSX7Q7RTT5 188 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 TREM1Q9NP99 234 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 EPDR1Q9UM22 224 aa9.94□□□□□ -0.82
RPAIN-211ENST00000572174 hCG_2014768A0A024R1R8 64 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 TRGV11A0A075B6L2 103 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 TRAV21A0A0B4J279 112 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 PLAC8L1A1L4L8 177 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 DEFB130BP0DP73 79 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 DEFB130AP0DP74 79 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 FLI1Q01543 452 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-211ENST00000572174 ZNF415Q09FC8 603 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 DAZ2Q13117 558 aaKnown RBP9.93□□□□□ -0.82
RPAIN-211ENST00000572174 FAM159AQ6UWV7 190 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 SLC51BQ86UW2 128 aa9.93□□□□□ -0.82
RPAIN-211ENST00000572174 NOP10Q9NPE3 64 aaKnown RBP9.93□□□□□ -0.82
RPAIN-211ENST00000572174 FAM74A7A6NL05 159 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 LY6G6CO95867 125 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 H2AFB1P0C5Y9 115 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 FGF8P55075 233 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-211ENST00000572174 TCL1AP56279 114 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 GNG5P63218 68 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 SFT2D1Q8WV19 159 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 MBD3L1Q8WWY6 194 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 KCNS1Q96KK3 526 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
RPAIN-211ENST00000572174 P0DMU3 169 aa9.91□□□□□ -0.82
RPAIN-211ENST00000572174 FAM231AP0DMU4 169 aa9.91□□□□□ -0.82
RPAIN-211ENST00000572174 FAM231CP0DMU5 169 aa9.91□□□□□ -0.82
RPAIN-211ENST00000572174 HTN3P15516 51 aa9.91□□□□□ -0.82
RPAIN-211ENST00000572174 UBE2G2P60604 165 aa9.91□□□□□ -0.82
RPAIN-211ENST00000572174 PSG8Q9UQ74 426 aa9.91□□□□□ -0.82
RPAIN-211ENST00000572174 MUC4Q99102 2169 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 PEX7O00628 323 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 PRM2P04554 102 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 UBE2G1P62253 170 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 TDRG1Q3Y452 100 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 SMUG1Q53HV7 270 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 PRR9Q5T870 116 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 CST9LP1Q5W188 147 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 LINC00612Q8N6U2 182 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 FMC1Q96HJ9 113 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 MANBALQ9NQG1 85 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 APLNQ9ULZ1 77 aa9.9□□□□□ -0.82
RPAIN-211ENST00000572174 S100A9P06702 114 aaKnown RBP9.89□□□□□ -0.83
RPAIN-211ENST00000572174 PRNTQ86SH4 94 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 C11orf72Q8NBR9 251 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 C18orf15Q96N68 181 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 TXNDC17Q9BRA2 123 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 SPXQ9BT56 116 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 TMPRSS5Q9H3S3 457 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 GSN-AS1Q9NRJ2 163 aa9.89□□□□□ -0.83
RPAIN-211ENST00000572174 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
RPAIN-211ENST00000572174 TRAV1-1A0A0B4J248 108 aa9.88□□□□□ -0.83
RPAIN-211ENST00000572174 PFN1P07737 140 aaKnown RBP9.88□□□□□ -0.83
RPAIN-211ENST00000572174 SULT1A2P50226 295 aa9.88□□□□□ -0.83
RPAIN-211ENST00000572174 NAGKQ9UJ70 344 aa9.88□□□□□ -0.83
RPAIN-211ENST00000572174 ZFP30Q9Y2G7 519 aa9.88□□□□□ -0.83
RPAIN-211ENST00000572174 KLF12Q9Y4X4 402 aa9.88□□□□□ -0.83
RPAIN-211ENST00000572174 TRGV1A0A0A0MS02 117 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 GAGE12BA1L429 117 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 F5H768 121 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 GAGE7O76087 117 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 IFNA1P01562 189 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 GAGE12FP0CL80 117 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 GAGE12GP0CL81 117 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 GAGE12IP0CL82 117 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 AKR1C3P42330 323 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 MUC21Q5SSG8 566 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 TP53TG3Q9ULZ0 132 aa9.87□□□□□ -0.83
RPAIN-211ENST00000572174 KMT2CQ8NEZ4 4911 aaKnown RBP9.87□□□□□ -0.83
RPAIN-211ENST00000572174 PAGE4O60829 102 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 GCGP01275 180 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 IGLV2-11P01706 119 aa9.86□□□□□ -0.83
RPAIN-211ENST00000572174 TAGLN2P37802 199 aaKnown RBP9.86□□□□□ -0.83
RPAIN-211ENST00000572174 TMEM183BQ1AE95 376 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms