RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
SCARF1-204ENST00000570902 KLLNB2CW77 178 aa12.91□□□□□ -0.34
SCARF1-204ENST00000570902 FAM229AH3BQW9 127 aa12.91□□□□□ -0.34
SCARF1-204ENST00000570902 PYYP10082 97 aa12.91□□□□□ -0.34
SCARF1-204ENST00000570902 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
SCARF1-204ENST00000570902 IBA57Q5T440 356 aaKnown RBP12.91□□□□□ -0.34
SCARF1-204ENST00000570902 LYPD5Q6UWN5 251 aa12.91□□□□□ -0.34
SCARF1-204ENST00000570902 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
SCARF1-204ENST00000570902 C17orf112F2Z3M2 114 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 GCSHP23434 173 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 MIR17HGQ75NE6 70 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 LINC00477Q96M19 166 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 KCNIP2Q9NS61 270 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 TMEM14CQ9P0S9 112 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 HHLA3Q9XRX5 114 aa12.9□□□□□ -0.34
SCARF1-204ENST00000570902 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 SMR3BP02814 79 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-204ENST00000570902 CRYBA4P53673 196 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 CD300CQ08708 224 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 Q5BKY6 102 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 SCGB1C1Q8TD33 95 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 BLNKQ8WV28 456 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 VGLL1Q99990 258 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 SLC25A2Q9BXI2 301 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 WFDC1Q9HC57 220 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 PRELID1Q9Y255 219 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 TIMM9Q9Y5J7 89 aa12.89□□□□□ -0.35
SCARF1-204ENST00000570902 TRBV19A0A075B6N1 114 aa12.88□□□□□ -0.35
SCARF1-204ENST00000570902 GIPP09681 153 aaPredicted RBP12.88□□□□□ -0.35
SCARF1-204ENST00000570902 HIST1H1EP10412 219 aaKnown RBP12.88□□□□□ -0.35
SCARF1-204ENST00000570902 EVI2AP22794 236 aa12.88□□□□□ -0.35
SCARF1-204ENST00000570902 RNASE4P34096 147 aaKnown RBP12.88□□□□□ -0.35
SCARF1-204ENST00000570902 ERCC8Q13216 396 aa12.88□□□□□ -0.35
SCARF1-204ENST00000570902 FAM19A4Q96LR4 140 aa12.88□□□□□ -0.35
SCARF1-204ENST00000570902 SRRM2Q9UQ35 2752 aaKnown RBP12.88□□□□□ -0.35
SCARF1-204ENST00000570902 M0R3E3 92 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 RGS13O14921 159 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 GPX1P07203 203 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 NMBP08949 121 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 Q6ZSN1 163 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 FAM167A-AS1Q96KT0 104 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
SCARF1-204ENST00000570902 NDUFB4O95168 129 aa12.86□□□□□ -0.35
SCARF1-204ENST00000570902 CRISP2P16562 243 aa12.86□□□□□ -0.35
SCARF1-204ENST00000570902 FHL2Q14192 279 aa12.86□□□□□ -0.35
SCARF1-204ENST00000570902 ASB13Q8WXK3 278 aa12.86□□□□□ -0.35
SCARF1-204ENST00000570902 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
SCARF1-204ENST00000570902 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
SCARF1-204ENST00000570902 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
SCARF1-204ENST00000570902 MRPL16Q9NX20 251 aaKnown RBP12.86□□□□□ -0.35
SCARF1-204ENST00000570902 OR10J4P0C629 311 aa12.85□□□□□ -0.35
SCARF1-204ENST00000570902 SRIP30626 198 aa12.85□□□□□ -0.35
SCARF1-204ENST00000570902 PDE6HQ13956 83 aa12.85□□□□□ -0.35
SCARF1-204ENST00000570902 EXOC3-AS1Q8N2X6 119 aa12.85□□□□□ -0.35
SCARF1-204ENST00000570902 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
SCARF1-204ENST00000570902 OR51M1Q9H341 326 aa12.85□□□□□ -0.35
SCARF1-204ENST00000570902 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
SCARF1-204ENST00000570902 IGHV1OR15-1A0A075B7D0 117 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 TRGV4A0A0C4DH28 118 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 NBEAP1P0C6P0 100 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 C10orf126Q8N4M7 172 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 PCNPQ8WW12 178 aaKnown RBP12.84□□□□□ -0.35
SCARF1-204ENST00000570902 AQP10Q96PS8 301 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 TMEM70Q9BUB7 260 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
SCARF1-204ENST00000570902 J3QL48 77 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 K7EQD1 137 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 OR7C2O60412 319 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 WFDC10BQ8IUB3 73 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 OR2T35Q8NGX2 323 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
SCARF1-204ENST00000570902 IGLV5-52A0A0A0MRZ9 124 aa12.82□□□□□ -0.36
SCARF1-204ENST00000570902 EIF3GO75821 320 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCARF1-204ENST00000570902 FAM122CQ6P4D5 195 aa12.82□□□□□ -0.36
SCARF1-204ENST00000570902 IQCF2Q8IXL9 164 aa12.82□□□□□ -0.36
SCARF1-204ENST00000570902 NTN5Q8WTR8 489 aaPredicted RBP12.82□□□□□ -0.36
SCARF1-204ENST00000570902 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
SCARF1-204ENST00000570902 ORM1P02763 201 aa12.81□□□□□ -0.36
SCARF1-204ENST00000570902 CRYGDP07320 174 aa12.81□□□□□ -0.36
SCARF1-204ENST00000570902 ZFAND2AQ8N6M9 145 aa12.81□□□□□ -0.36
SCARF1-204ENST00000570902 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-204ENST00000570902 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
SCARF1-204ENST00000570902 PSCAO43653 123 aa12.8□□□□□ -0.36
SCARF1-204ENST00000570902 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
SCARF1-204ENST00000570902 HAMPP81172 84 aa12.8□□□□□ -0.36
SCARF1-204ENST00000570902 PHYHIPLQ96FC7 376 aa12.8□□□□□ -0.36
SCARF1-204ENST00000570902 TXNDC17Q9BRA2 123 aa12.8□□□□□ -0.36
SCARF1-204ENST00000570902 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-204ENST00000570902 G3V3Q6 166 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-204ENST00000570902 GYPEP15421 78 aa12.79□□□□□ -0.36
SCARF1-204ENST00000570902 TAS2R45P59539 299 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms