RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 IGKV3-20P01619 116 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 RPS20P60866 119 aaKnown RBP11.93□□□□□ -0.5
USP43-202ENST00000570475 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 TRGV3P03979 118 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 SEC11AP67812 179 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 CFHR4Q92496 578 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 RAXQ9Y2V3 346 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 SMIM13P0DJ93 91 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 HIST1H4GQ99525 98 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 RNF5Q99942 180 aa11.92□□□□□ -0.5
USP43-202ENST00000570475 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 C2orf91Q6ZV80 131 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 TCF15Q12870 199 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 ZNF502Q8TBZ5 544 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 TMEM8BA6NDV4 472 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
USP43-202ENST00000570475 EMP1P54849 157 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 HSD52Q0P140 79 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 PDE6HQ13956 83 aa11.91□□□□□ -0.5
USP43-202ENST00000570475 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
USP43-202ENST00000570475 SMIM17P0DL12 118 aa11.9□□□□□ -0.5
USP43-202ENST00000570475 SAA4P35542 130 aa11.9□□□□□ -0.5
USP43-202ENST00000570475 IGKCP01834 107 aa11.9□□□□□ -0.5
USP43-202ENST00000570475 HTN1P15515 57 aa11.9□□□□□ -0.5
USP43-202ENST00000570475 NACAE9PAV3 2078 aa11.9□□□□□ -0.5
USP43-202ENST00000570475 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.51
USP43-202ENST00000570475 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.51
USP43-202ENST00000570475 AGPAT4-IT1Q9H0P7 198 aa11.9□□□□□ -0.51
USP43-202ENST00000570475 DCHS2Q6V1P9 2916 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 A0A096LNJ9 63 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 PF4V1P10720 104 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 LGALS9BQ3B8N2 356 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 LGALS9CQ6DKI2 356 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
USP43-202ENST00000570475 JKAMPQ9P055 326 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 PHLDA3Q9Y5J5 127 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 IGKV2D-26A0A0A0MRZ7 120 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
USP43-202ENST00000570475 CDKN1BP46527 198 aa11.88□□□□□ -0.51
USP43-202ENST00000570475 LY6DQ14210 128 aa11.88□□□□□ -0.51
USP43-202ENST00000570475 C14orf178Q8N769 122 aaPredicted RBP11.88□□□□□ -0.51
USP43-202ENST00000570475 SMAD5-AS1Q9Y6J3 95 aa11.88□□□□□ -0.51
USP43-202ENST00000570475 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
USP43-202ENST00000570475 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
USP43-202ENST00000570475 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 C9orf118A6NHY6 69 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 F6UB75 175 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 LY6LH3BQJ8 138 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 DPM2O94777 84 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 FXYD2P54710 66 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 CHAC1Q9BUX1 264 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 BPESC1Q9GZL8 116 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
USP43-202ENST00000570475 TGFAP01135 160 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
USP43-202ENST00000570475 IGF1P05019 195 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 AMTNQ6UX39 209 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 OR11H6Q8NGC7 330 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 OR4X2Q8NGF9 303 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP43-202ENST00000570475 SCGB3A1Q96QR1 104 aa11.86□□□□□ -0.51
USP43-202ENST00000570475 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
USP43-202ENST00000570475 Q5PR19 223 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 ZFYVE26Q68DK2 2539 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 AGRNO00468 2067 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 TTC9CQ8N5M4 171 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 SRSF8Q9BRL6 282 aaKnown RBP11.85□□□□□ -0.51
USP43-202ENST00000570475 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 MRPS12O15235 138 aaKnown RBP11.85□□□□□ -0.51
USP43-202ENST00000570475 PPBPP02775 128 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 C8orf86Q6ZUL3 223 aa11.85□□□□□ -0.51
USP43-202ENST00000570475 LOC107984156A0A0G2JMH3 177 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 ARL17AQ8IVW1 177 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 Q8N9W7 124 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 OR10J6PQ8NGY7 276 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 F8W735 103 aaPredicted RBP11.84□□□□□ -0.51
USP43-202ENST00000570475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
USP43-202ENST00000570475 H3BRM9 83 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 K7ENP7 123 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 M0R1W7 72 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 NPBQ8NG41 125 aa11.84□□□□□ -0.51
USP43-202ENST00000570475 OR1N2Q8NGR9 330 aa11.83□□□□□ -0.51
USP43-202ENST00000570475 BUB3O43684 328 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
USP43-202ENST00000570475 LAGE3Q14657 143 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 IGF2-ASQ6U949 168 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 IGKV3D-20A0A0C4DH25 116 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 OR11H1Q8NG94 326 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
USP43-202ENST00000570475 C11orf21Q9P2W6 132 aa11.82□□□□□ -0.52
USP43-202ENST00000570475 PAX8Q06710 450 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 429.7 ms