RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 RGS13O14921 159 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 PTTG1O95997 202 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 C6orf223Q8N319 242 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 ST6GAL2Q96JF0 529 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 SMIM3Q9BZL3 60 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 Q9H8V8 135 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 WFDC1Q9HC57 220 aa11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 MRPS16Q9Y3D3 137 aaKnown RBP11.84□□□□□ -0.51
MAP1LC3B-208ENST00000570189 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
MAP1LC3B-208ENST00000570189 TRGV1A0A0A0MS02 117 aa11.83□□□□□ -0.52
MAP1LC3B-208ENST00000570189 ACOT6Q3I5F7 207 aaPredicted RBP11.83□□□□□ -0.52
MAP1LC3B-208ENST00000570189 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
MAP1LC3B-208ENST00000570189 OTORQ9NRC9 128 aa11.83□□□□□ -0.52
MAP1LC3B-208ENST00000570189 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
MAP1LC3B-208ENST00000570189 A0A0J9YY99 117 aa11.82□□□□□ -0.52
MAP1LC3B-208ENST00000570189 ESRGQ1W209 222 aa11.82□□□□□ -0.52
MAP1LC3B-208ENST00000570189 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
MAP1LC3B-208ENST00000570189 TTC32Q5I0X7 151 aa11.82□□□□□ -0.52
MAP1LC3B-208ENST00000570189 Q8TAT8 98 aa11.82□□□□□ -0.52
MAP1LC3B-208ENST00000570189 ASB13Q8WXK3 278 aa11.82□□□□□ -0.52
MAP1LC3B-208ENST00000570189 PCLOQ9Y6V0 5065 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 A0A096LPF7 62 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 ZNF415Q09FC8 603 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 SLAQ13239 276 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 Q6ZQT7 251 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 AQP10Q96PS8 301 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 ARPC5LQ9BPX5 153 aa11.81□□□□□ -0.52
MAP1LC3B-208ENST00000570189 SUN5Q8TC36 379 aa11.8□□□□□ -0.52
MAP1LC3B-208ENST00000570189 PSMG3Q9BT73 122 aaPredicted RBP11.8□□□□□ -0.52
MAP1LC3B-208ENST00000570189 A0A1W2PPV4 95 aa11.79□□□□□ -0.52
MAP1LC3B-208ENST00000570189 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
MAP1LC3B-208ENST00000570189 RASL10AQ92737 203 aa11.79□□□□□ -0.52
MAP1LC3B-208ENST00000570189 SPXQ9BT56 116 aa11.79□□□□□ -0.52
MAP1LC3B-208ENST00000570189 PGPA6NDG6 321 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 STAG3L2P0CL84 134 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 STAG3L3P0CL85 134 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 RAB2AP61019 212 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 SERF2P84101 59 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 TNP2Q05952 138 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 CMTM2Q8TAZ6 248 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
MAP1LC3B-208ENST00000570189 RYR1P21817 5038 aa11.77□□□□□ -0.52
MAP1LC3B-208ENST00000570189 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
MAP1LC3B-208ENST00000570189 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.53
MAP1LC3B-208ENST00000570189 FAM159AQ6UWV7 190 aa11.77□□□□□ -0.53
MAP1LC3B-208ENST00000570189 MED28Q9H204 178 aa11.77□□□□□ -0.53
MAP1LC3B-208ENST00000570189 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
MAP1LC3B-208ENST00000570189 MBP02144 154 aa11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 GIPP09681 153 aaPredicted RBP11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 CDC34P49427 236 aaPredicted RBP11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 CRYBA4P53673 196 aa11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 FHL2Q14192 279 aa11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 KRTAP17-1Q9BYP8 105 aa11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 ICOSQ9Y6W8 199 aa11.76□□□□□ -0.53
MAP1LC3B-208ENST00000570189 PAX4O43316 350 aa11.75□□□□□ -0.53
MAP1LC3B-208ENST00000570189 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
MAP1LC3B-208ENST00000570189 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 ATP6V0CP27449 155 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 MUC21Q5SSG8 566 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TVP23CQ96ET8 276 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
MAP1LC3B-208ENST00000570189 EIF3GO75821 320 aaKnown RBP eCLIP11.73□□□□□ -0.53
MAP1LC3B-208ENST00000570189 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
MAP1LC3B-208ENST00000570189 ZNF575Q86XF7 245 aa11.73□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TMEM183AQ8IXX5 376 aa11.73□□□□□ -0.53
MAP1LC3B-208ENST00000570189 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
MAP1LC3B-208ENST00000570189 SIVA1O15304 175 aa11.72□□□□□ -0.53
MAP1LC3B-208ENST00000570189 GCHFRP30047 84 aa11.72□□□□□ -0.53
MAP1LC3B-208ENST00000570189 KCNS1Q96KK3 526 aa11.72□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 RNF222A6NCQ9 220 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 FBLL1A6NHQ2 334 aaKnown RBP11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 CDK2AP2O75956 126 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 IGHV3-53P01767 116 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TCRAP04437 139 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 Q5BKY6 102 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 C8orf49Q96NF6 230 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 TMEM167BQ9NRX6 74 aa11.71□□□□□ -0.53
MAP1LC3B-208ENST00000570189 LRP1BQ9NZR2 4599 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 K7EP13 123 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 M0R2P5 195 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 CXorf1O96002 111 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms