RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 GADD45AP24522 165 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 MT3P25713 68 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 HSPA13P48723 471 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 CCR6P51684 374 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 GUK1Q16774 197 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 HSD17B12Q53GQ0 312 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 FAM222AQ5U5X8 452 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 SPATA31B1PQ5VZV4 182 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 MORN3Q6PF18 240 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 IDO2Q6ZQW0 420 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 Q6ZR54 194 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 Q6ZS49 121 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 NIT1Q86X76 327 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 H1FOOQ8IZA3 346 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 ORMDL3Q8N138 153 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 TMEM256Q8N2U0 113 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 PACRGLQ8N7B6 248 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 SLC35G3Q8N808 338 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 VSTM2AQ8TAG5 236 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 TMEM167AQ8TBQ9 72 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 SCGB1C1Q8TD33 95 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 ARHGAP5-AS1Q96IT6 56 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 CMSS1Q9BQ75 279 aaKnown RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 PYGO2Q9BRQ0 406 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 PECRQ9BY49 303 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 ZNF436Q9C0F3 470 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 C11orf68Q9H3H3 251 aaKnown RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 WFDC1Q9HC57 220 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 C8orf4Q9NR00 106 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 FKBP14Q9NWM8 211 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 MRPL27Q9P0M9 148 aaKnown RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 C14orf166Q9Y224 244 aaKnown RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 PRELID3BQ9Y3B1 194 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 UFC1Q9Y3C8 167 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
CNOT1-221ENST00000569924 PKHD1P08F94 4074 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 DNAH2Q9P225 4427 aa2.11□□□□□ -2.07
CNOT1-221ENST00000569924 A0A1B0GW64 132 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 OR4C46A6NHA9 309 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 C9JQL5 133 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 C11orf94C9JXX5 98 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 E7EUB6 86 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 DENRO43583 198 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 DEDDO75618 318 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 IGKV1-39P01597 117 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 HLA-DQB1P01920 261 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 IGKV1D-39P04432 117 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 ATP5G1P05496 136 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 PRB4P10163 310 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 CD36P16671 472 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 CXCL2P19875 107 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 CXCL3P19876 107 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 RPL27AP46776 148 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 RPS10P46783 165 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 CMC4P56277 68 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 MP68P56378 58 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 RAB5BP61020 215 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 DAD1P61803 113 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 INSL4Q14641 139 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 MSMO1Q15800 293 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 DEFB135Q30KP9 77 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 CENPWQ5EE01 88 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 LAIR2Q6ISS4 152 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 UNQ9165/PRO28630Q6UXU0 137 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 SLC51BQ86UW2 128 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 OR5H2Q8NGV7 314 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 OR4A5Q8NH83 315 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 NARS2Q96I59 477 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 GINS4Q9BRT9 223 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 RTBDNQ9BSG5 229 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 MND1Q9BWT6 205 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 C6orf62Q9GZU0 229 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 DAZ1Q9NQZ3 744 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 LSM2Q9Y333 95 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 LSM5Q9Y4Y9 91 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 RBM7Q9Y580 266 aaKnown RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 ZNF706Q9Y5V0 76 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-221ENST00000569924 MUC4Q99102 2169 aa2.1□□□□□ -2.07
CNOT1-221ENST00000569924 IGHV3-49A0A0A0MS15 119 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 TGIF2-C20orf24A0A0A6YYL0 155 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 A0A1B0GVY2 172 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 IGLC7A0M8Q6 106 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 SMIM9A6NGZ8 99 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 A8MWL6 223 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 NDUFA4O00483 81 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 CYB5BO43169 146 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 RBFOX2O43251 390 aaKnown RBP eCLIP2.09□□□□□ -2.07
CNOT1-221ENST00000569924 S1PR2O95136 353 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 HRASP01112 189 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 IFNA4P05014 189 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 SEC11BP0C7V7 166 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 HIST1H1DP16402 221 aaKnown RBP2.09□□□□□ -2.07
CNOT1-221ENST00000569924 RAB2AP61019 212 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 RPL30P62888 115 aaKnown RBP2.09□□□□□ -2.07
CNOT1-221ENST00000569924 SYCNQ0VAF6 134 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 EIF4EBP1Q13541 118 aaPredicted RBP2.09□□□□□ -2.07
CNOT1-221ENST00000569924 TMEM91Q6ZNR0 172 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 FA2HQ7L5A8 372 aa2.09□□□□□ -2.07
CNOT1-221ENST00000569924 FAM19A3Q7Z5A8 133 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms