RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SMIM12Q96EX1 92 aa7.44□□□□□ -1.22
GDE1-205ENST00000569899 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
GDE1-205ENST00000569899 AGPAT4-IT1Q9H0P7 198 aa7.44□□□□□ -1.22
GDE1-205ENST00000569899 MAP6D1Q9H9H5 199 aa7.44□□□□□ -1.22
GDE1-205ENST00000569899 FBLL1A6NHQ2 334 aaKnown RBP7.43□□□□□ -1.22
GDE1-205ENST00000569899 B4DEV8 164 aa7.43□□□□□ -1.22
GDE1-205ENST00000569899 DEFB131AP59861 70 aa7.43□□□□□ -1.22
GDE1-205ENST00000569899 TMEM78Q5T7P6 136 aa7.43□□□□□ -1.22
GDE1-205ENST00000569899 OR10J6PQ8NGY7 276 aa7.43□□□□□ -1.22
GDE1-205ENST00000569899 SFRP2Q96HF1 295 aa7.43□□□□□ -1.22
GDE1-205ENST00000569899 PRR25Q96S07 402 aa7.43□□□□□ -1.22
GDE1-205ENST00000569899 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
GDE1-205ENST00000569899 A0A087WWC5 75 aa7.42□□□□□ -1.22
GDE1-205ENST00000569899 GYPEP15421 78 aa7.42□□□□□ -1.22
GDE1-205ENST00000569899 ZNF138P52744 262 aa7.42□□□□□ -1.22
GDE1-205ENST00000569899 ODF3L2Q3SX64 289 aa7.42□□□□□ -1.22
GDE1-205ENST00000569899 LINC00322Q6ZN03 302 aaPredicted RBP7.42□□□□□ -1.22
GDE1-205ENST00000569899 ZNF492Q9P255 531 aa7.42□□□□□ -1.22
GDE1-205ENST00000569899 ZFP30Q9Y2G7 519 aa7.42□□□□□ -1.22
GDE1-205ENST00000569899 A0A0J9YX75 114 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 KNCNA6PVL3 124 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 MT-ND4LP03901 98 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 CT45A10P0DMU9 189 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 ERVFC1-1P60608 527 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 BTN1A1Q13410 526 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 IBA57Q5T440 356 aaKnown RBP7.41□□□□□ -1.22
GDE1-205ENST00000569899 C9orf66Q5T8R8 295 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 OR2K2Q8NGT1 345 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 NDFIP1Q9BT67 221 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 SAV1Q9H4B6 383 aaPredicted RBP7.41□□□□□ -1.22
GDE1-205ENST00000569899 H7BYZ3 331 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 J3KRW8 73 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 IGKV3-20P01619 116 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 ZNF80P51504 273 aaPredicted RBP7.41□□□□□ -1.22
GDE1-205ENST00000569899 SAPCD1Q5SSQ6 148 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 PRR9Q5T870 116 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 APRG1Q8IVJ8 170 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 OR10G8Q8NGN5 311 aa7.41□□□□□ -1.22
GDE1-205ENST00000569899 COL6A5A8TX70 2615 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 C19orf71A6NCJ1 209 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 CRIP1P50238 77 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 SMUG1Q53HV7 270 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 ACTL10Q5JWF8 245 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 EBLN2Q6P2I7 272 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 C15orf54Q8N8G6 183 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 LINC00477Q96M19 166 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 WWC2-AS2Q96NR7 200 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 OSTCQ9NRP0 149 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 PPP1R14DQ9NXH3 145 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 V9GYV3 84 aa7.4□□□□□ -1.22
GDE1-205ENST00000569899 NOTCH3Q9UM47 2321 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 TRRAPQ9Y4A5 3859 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 SH2D1AO60880 128 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 CA1P00915 261 aaPredicted RBP7.39□□□□□ -1.23
GDE1-205ENST00000569899 CD7P09564 240 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 HLA-DRB4P13762 266 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 IGLL1P15814 213 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 BEAN1Q3B7T3 259 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 ZFAND2AQ8N6M9 145 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.39□□□□□ -1.23
GDE1-205ENST00000569899 OR4B1Q8NGF8 309 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 FAM19A4Q96LR4 140 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 SMCO4Q9NRQ5 59 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 HLA-DRB4X5D2U9 266 aa7.39□□□□□ -1.23
GDE1-205ENST00000569899 RBMY1BA6NDE4 496 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 RBMY1EA6NEQ0 496 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 ZNF705GA8MUZ8 300 aaPredicted RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 OR11H12B2RN74 326 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 PPP1R2P9O14990 202 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 GATCO43716 136 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 P01737 135 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 RBMY1DP0C7P1 496 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 INSL3P51460 131 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 RPL19P84098 196 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 Q6ZQT7 251 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 LURAP1LQ8IV03 231 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 WFDC9Q8NEX5 89 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 TMEM242Q9NWH2 141 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 LENEPQ9Y5L5 61 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 M0R2Z0 102 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 DUSP14O95147 198 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 CRISP2P16562 243 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 AMTNQ6UX39 209 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 Q6ZSN1 163 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 YPEL4Q96NS1 127 aa7.38□□□□□ -1.23
GDE1-205ENST00000569899 MCRIP2Q9BUT9 160 aaKnown RBP7.38□□□□□ -1.23
GDE1-205ENST00000569899 A8MTW9 85 aa7.37□□□□□ -1.23
GDE1-205ENST00000569899 H3BMM0 161 aa7.37□□□□□ -1.23
GDE1-205ENST00000569899 TCL1AP56279 114 aa7.37□□□□□ -1.23
GDE1-205ENST00000569899 SPINK13Q1W4C9 94 aa7.37□□□□□ -1.23
GDE1-205ENST00000569899 OR2D3Q8NGH3 330 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms