RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ATP5G1P05496 136 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 DEFB130BP0DP73 79 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 DEFB130AP0DP74 79 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 ATP5G3P48201 142 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 CD300CQ08708 224 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 ANXA2RQ3ZCQ2 193 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 ZFP69Q49AA0 526 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 ZFAND2AQ8N6M9 145 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 STOML3Q8TAV4 291 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 ZNF471Q9BX82 626 aaPredicted RBP6.98□□□□□ -1.29
CLN6-209ENST00000569336 NKX6-2Q9C056 277 aaPredicted RBP6.98□□□□□ -1.29
CLN6-209ENST00000569336 MAP1LC3BQ9GZQ8 125 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 NOP10Q9NPE3 64 aaKnown RBP6.98□□□□□ -1.29
CLN6-209ENST00000569336 CYTL1Q9NRR1 136 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 APLNQ9ULZ1 77 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
CLN6-209ENST00000569336 TCRAP04437 139 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 PRM2P04554 102 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 SEC11BP0C7V7 166 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 P0DMU3 169 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 FAM231AP0DMU4 169 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 FAM231CP0DMU5 169 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 TPT1P13693 172 aaKnown RBP6.97□□□□□ -1.29
CLN6-209ENST00000569336 DAZ2Q13117 558 aaKnown RBP6.97□□□□□ -1.29
CLN6-209ENST00000569336 IBA57Q5T440 356 aaKnown RBP6.97□□□□□ -1.29
CLN6-209ENST00000569336 SSX7Q7RTT5 188 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 TCTE3Q8IZS6 198 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 CYB561D1Q8N8Q1 229 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 C15orf53Q8NAA6 179 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 OR11H4Q8NGC9 324 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 ATG101Q9BSB4 218 aa6.97□□□□□ -1.29
CLN6-209ENST00000569336 IGHV1OR15-1A0A075B7D0 117 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 GGTLC3B5MD39 225 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 PPT1P50897 306 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 GNG5P63218 68 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 ZNF415Q09FC8 603 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 ZNF726P1Q15940 193 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 PRR9Q5T870 116 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 Q6AWC8 147 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 EIF5AL1Q6IS14 154 aaKnown RBP6.96□□□□□ -1.3
CLN6-209ENST00000569336 DPPA3Q6W0C5 159 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 Q6ZNX1 250 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 TMEM75Q8N9X5 138 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 TCEAL7Q9BRU2 100 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 TREM1Q9NP99 234 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 ARL2-SNX15V9GYD0 113 aa6.96□□□□□ -1.3
CLN6-209ENST00000569336 TRGV11A0A075B6L2 103 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 IFNA7P01567 189 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 FGF8P55075 233 aaPredicted RBP6.95□□□□□ -1.3
CLN6-209ENST00000569336 TCL1AP56279 114 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
CLN6-209ENST00000569336 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 TMUB2Q71RG4 321 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 AKAP14Q86UN6 197 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
CLN6-209ENST00000569336 TRAV8-1A0A0A6YYK1 113 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 TRAV21A0A0B4J279 112 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 GAGE12BA1L429 117 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 F5H768 121 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 F6UZH7 168 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 GAGE7O76087 117 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 C1QBP02746 253 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 GAGE12FP0CL80 117 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 GAGE12GP0CL81 117 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 GAGE12IP0CL82 117 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 UBE2G2P60604 165 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 FLI1Q01543 452 aaPredicted RBP6.94□□□□□ -1.3
CLN6-209ENST00000569336 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 UBE2DNLQ8IWF7 75 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 LINC00612Q8N6U2 182 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 C11orf72Q8NBR9 251 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 FAM213BQ8TBF2 198 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 HIST1H2BAQ96A08 127 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 KCNS1Q96KK3 526 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 GSN-AS1Q9NRJ2 163 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 PLA2G2EQ9NZK7 142 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 EPDR1Q9UM22 224 aa6.94□□□□□ -1.3
CLN6-209ENST00000569336 TRGV2A0A075B6R0 118 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 FAM74A7A6NL05 159 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 TEX46H3BTG2 121 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 PEX7O00628 323 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 FHITP49789 147 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 RAB5CP51148 216 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 TDRG1Q3Y452 100 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 LGALSLQ3ZCW2 172 aaPredicted RBP6.93□□□□□ -1.3
CLN6-209ENST00000569336 MUC21Q5SSG8 566 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 SAPCD1Q5SSQ6 148 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 Q6ZTI0 123 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 SDF2L1Q9HCN8 221 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 NAGKQ9UJ70 344 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 KLF12Q9Y4X4 402 aa6.93□□□□□ -1.3
CLN6-209ENST00000569336 HERC2O95714 4834 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 hCG_2014768A0A024R1R8 64 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 TRGV1A0A0A0MS02 117 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 SMUG1Q53HV7 270 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 PRNTQ86SH4 94 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms