RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 IGKV3OR2-268A0A0C4DH90 116 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 LY6DQ14210 128 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 P0C879 139 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 IGLC6P0CF74 106 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 EFNA4P52798 201 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 MLST8Q9BVC4 326 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 BRWD1Q9NSI6 2320 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 B3GALT5-AS1P59052 145 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 MIAQ16674 131 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 NRGNQ92686 78 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 RNASE6Q93091 150 aaKnown RBP5.61□□□□□ -1.51
CNOT1-216ENST00000569240 MDFICQ9P1T7 246 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 TSC2P49815 1807 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 TRAV12-2A0A075B6T6 113 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 RNF144BQ7Z419 303 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 C8orf49Q96NF6 230 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 LRRK1Q38SD2 2015 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 BCE1O60756 84 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 UBE2BP63146 152 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 Q6JHZ5 121 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 ZNF491Q8N8L2 437 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 KAAG1Q9UBP8 84 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 ALPK2Q86TB3 2170 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 DOCK6Q96HP0 2047 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 RP1P56715 2156 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 WT1-ASQ06250 92 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 C16orf54Q6UWD8 224 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 LINC00173Q6ZV60 143 aa5.61□□□□□ -1.51
CNOT1-216ENST00000569240 UBR3Q6ZT12 1888 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 TNRC6AQ8NDV7 1962 aaKnown RBP5.6□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV1-58A0A0C4DH39 117 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 CFHR4Q92496 578 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 KLK10O43240 276 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 LINC01565O15544 149 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 DYNAPQ8N1N2 210 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 ZNF625Q96I27 306 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-216ENST00000569240 FOXE3Q13461 319 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 DSCR9P59020 149 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 PLXNB2O15031 1838 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV3OR16-13A0A075B7E8 117 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV3-74A0A0B4J1X5 117 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 A0A0J9YX75 114 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
CNOT1-216ENST00000569240 HIST2H2BCQ6DN03 193 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 HIST2H2BDQ6DRA6 164 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 BAALCQ8WXS3 180 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 IGHV3-35A0A0C4DH35 117 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 A0A0U1RRA0 63 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 IGKV1-16P04430 117 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 C2orf91Q6ZV80 131 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 VMO1Q7Z5L0 202 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 ZNF503Q96F45 646 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 BUB3O43684 328 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 RHPN1-AS1Q9BWJ2 59 aa5.59□□□□□ -1.51
CNOT1-216ENST00000569240 ZNF71Q9NQZ8 489 aaPredicted RBP5.59□□□□□ -1.52
CNOT1-216ENST00000569240 TP53TG3Q9ULZ0 132 aa5.59□□□□□ -1.52
CNOT1-216ENST00000569240 TRAV25A0A0B4J276 109 aa5.59□□□□□ -1.52
CNOT1-216ENST00000569240 IGKV3D-20A0A0C4DH25 116 aa5.59□□□□□ -1.52
CNOT1-216ENST00000569240 C5orf63A6NC05 138 aa5.59□□□□□ -1.52
CNOT1-216ENST00000569240 ITLN2Q8WWU7 325 aaPredicted RBP5.59□□□□□ -1.52
CNOT1-216ENST00000569240 PLXNA3P51805 1871 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV3OR16-12A0A075B7B8 117 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 MUC7Q8TAX7 377 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV3-66A0A0C4DH42 116 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 C17orf58Q2M2W7 97 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 Q9H8V8 135 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 NXPH4O95158 308 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 XGP55808 180 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 ARTNQ5T4W7 220 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 DOCK11Q5JSL3 2073 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 MBD3L4A6NDZ8 208 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-216ENST00000569240 MBD3L3A6NE82 208 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-216ENST00000569240 MBD3L5A6NJ08 208 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV3-23P01764 117 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 C9orf47Q6ZRZ4 202 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 MBD3L2Q8NHZ7 208 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-216ENST00000569240 SND1-IT1Q9HBX3 110 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 CACNA1DQ01668 2161 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV3-49A0A0A0MS15 119 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 IGLV2-8P01709 118 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 TPRP12270 2363 aaKnown RBP5.58□□□□□ -1.52
CNOT1-216ENST00000569240 ZSWIM8A7E2V4 1837 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 PROP1O75360 226 aa5.58□□□□□ -1.52
CNOT1-216ENST00000569240 RSPO1Q2MKA7 263 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-216ENST00000569240 ASCC3Q8N3C0 2202 aaKnown RBP5.57□□□□□ -1.52
CNOT1-216ENST00000569240 DOCK5Q9H7D0 1870 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV3-33P01772 117 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 BSPH1Q075Z2 132 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 C9orf106Q8NAJ2 232 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 SPRY4Q9C004 299 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 PRORYQ9H606 182 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 NREPQ16612 68 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 FANCD2OSQ96PS1 177 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 IGKV3-20P01619 116 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 TRBV12-3P01733 135 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 MRPL36Q9P0J6 103 aaKnown RBP5.57□□□□□ -1.52
CNOT1-216ENST00000569240 U3KQE9 123 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 LCTP09848 1927 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 CCL21O00585 134 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 USP17L23D6RBM5 183 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms