RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 TAS2R45P59539 299 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 RANP62826 216 aaKnown RBP5.42□□□□□ -1.54
CDH3-209ENST00000569080 ZNF266Q14584 549 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 Q6AWC8 147 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 PQLC2Q6ZP29 291 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 OR2G3Q8NGZ4 309 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 SCGB1C1Q8TD33 95 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 TMED6Q8WW62 240 aa5.42□□□□□ -1.54
CDH3-209ENST00000569080 GNPNAT1Q96EK6 184 aaPredicted RBP5.42□□□□□ -1.54
CDH3-209ENST00000569080 IGHV1OR15-1A0A075B7D0 117 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 A0A096LPF7 62 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 TRGV1A0A0A0MS02 117 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 A0A0J9YY99 117 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 RNF222A6NCQ9 220 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 GIPP09681 153 aaPredicted RBP5.41□□□□□ -1.54
CDH3-209ENST00000569080 OR5I1Q13606 314 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 ACOT6Q3I5F7 207 aaPredicted RBP5.41□□□□□ -1.54
CDH3-209ENST00000569080 SSX7Q7RTT5 188 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 SUN5Q8TC36 379 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 TVP23CQ96ET8 276 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 ATG101Q9BSB4 218 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 PSMG3Q9BT73 122 aaPredicted RBP5.41□□□□□ -1.54
CDH3-209ENST00000569080 UPK3BQ9BT76 320 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 OTORQ9NRC9 128 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 LENEPQ9Y5L5 61 aa5.41□□□□□ -1.54
CDH3-209ENST00000569080 TRAV8-1A0A0A6YYK1 113 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 RGS13O14921 159 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 HMGB3O15347 200 aaKnown RBP5.4□□□□□ -1.54
CDH3-209ENST00000569080 STAG3L2P0CL84 134 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 STAG3L3P0CL85 134 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 ARL14EPLP0DKL9 152 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 ATP6V0CP27449 155 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 CSN1S1P47710 185 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 CCL18P55774 89 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 GNG5P63218 68 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 ESRGQ1W209 222 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 TDRG1Q3Y452 100 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 C1orf134Q5TEV5 83 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 ARL6IP6Q8N6S5 226 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 HSD17B11Q8NBQ5 300 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 OR10G4Q8NGN3 311 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 OR10G9Q8NGN4 311 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 OR10G7Q8NGN6 311 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 ASB13Q8WXK3 278 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 ST6GAL2Q96JF0 529 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 MED28Q9H204 178 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 SH3BGRL3Q9H299 93 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 MRPL16Q9NX20 251 aaKnown RBP5.4□□□□□ -1.54
CDH3-209ENST00000569080 MDFICQ9P1T7 246 aa5.4□□□□□ -1.54
CDH3-209ENST00000569080 MRPS16Q9Y3D3 137 aaKnown RBP5.4□□□□□ -1.54
CDH3-209ENST00000569080 TRGV2A0A075B6R0 118 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 PGPA6NDG6 321 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 GGTLC3B5MD39 225 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 CDC34P49427 236 aaPredicted RBP5.39□□□□□ -1.55
CDH3-209ENST00000569080 TNP2Q05952 138 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 MUC21Q5SSG8 566 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 GOLT1AQ6ZVE7 132 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 C6orf223Q8N319 242 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 HYLS1Q96M11 299 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 TNFSF18Q9UNG2 199 aa5.39□□□□□ -1.55
CDH3-209ENST00000569080 A0A1W2PPV4 95 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 F6UZH7 168 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 IGLV2-11P01706 119 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 IGHV3-53P01767 116 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 GCHFRP30047 84 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 FHL2Q14192 279 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 ZNF726P1Q15940 193 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 SOHLH1Q5JUK2 328 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 RPL7L1Q6DKI1 246 aaKnown RBP5.38□□□□□ -1.55
CDH3-209ENST00000569080 ZNF575Q86XF7 245 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 CMTM2Q8TAZ6 248 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 RASL10AQ92737 203 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 RAB24Q969Q5 203 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 Q9H8V8 135 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 RPH3ALQ9UNE2 315 aa5.38□□□□□ -1.55
CDH3-209ENST00000569080 TRGV11A0A075B6L2 103 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 IGHV3-16A0A0C4DH30 117 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 TCRAP04437 139 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 SFTA3P0C7M3 94 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 MED14OSP0DP75 135 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 ZNF80P51504 273 aaPredicted RBP5.37□□□□□ -1.55
CDH3-209ENST00000569080 CRYBA4P53673 196 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 SERF2P84101 59 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 TMEM183BQ1AE95 376 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 FAM74A1Q5RGS3 127 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 TMEM183AQ8IXX5 376 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 C5orf17Q8NAS9 161 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 OR2T35Q8NGX2 323 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 C11orf21Q9P2W6 132 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
CDH3-209ENST00000569080 FXYD6-FXYD2A0A087WZ82 144 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 TRAV21A0A0B4J279 112 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 SERTM2A0A1B0GWG4 89 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 A0A1W2PPQ1 181 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 PAX4O43316 350 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 MBP02144 154 aa5.36□□□□□ -1.55
CDH3-209ENST00000569080 TYMSP04818 313 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms