RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CD164Q04900 197 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 ZNF816Q0VGE8 651 aaPredicted RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 CFAP126Q5VTH2 177 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 LINC00526Q96FQ7 95 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 EMC6Q9BV81 110 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 ULBP3Q9BZM4 244 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 NAA60Q9H7X0 242 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 PCTPQ9UKL6 214 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 HHLA3Q9XRX5 114 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 CHCHD2Q9Y6H1 151 aaPredicted RBP3.42□□□□□ -1.86
UBR1-208ENST00000569066 PLXNA4Q9HCM2 1894 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 ROBO1Q9Y6N7 1651 aa3.42□□□□□ -1.86
UBR1-208ENST00000569066 COL24A1Q17RW2 1714 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 GYPAP02724 150 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 S100A3P33764 101 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 MOBPQ13875 183 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 Q6ZS92 163 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 PPDPFLQ8WWR9 84 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 DSCR8Q96T75 97 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 TMEM70Q9BUB7 260 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 TMEM191AQ9H0A3 160 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 SLC39A9Q9NUM3 307 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 ZNF236Q9UL36 1845 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 ATG2BQ96BY7 2078 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 CEBPZOSA8MTT3 80 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 J3QLW9 94 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 M0R1B8 84 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 OR5AL1P0C617 328 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 SSR2P43308 183 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 FXYD6P3P58550 94 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 ZNF90Q03938 601 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 RPS19BP1Q86WX3 136 aaKnown RBP3.41□□□□□ -1.86
UBR1-208ENST00000569066 LINC00311Q8N616 119 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 PMCHL2Q9BQD1 86 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 KIAA1671Q9BY89 1806 aa3.41□□□□□ -1.86
UBR1-208ENST00000569066 DOCK11Q5JSL3 2073 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 RIIAD1A6NNX1 92 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 A8MWL6 223 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 IGLL5B9A064 214 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 K7EM74 188 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 UQCRQO14949 82 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 LGALS1P09382 135 aaKnown RBP3.4□□□□□ -1.86
UBR1-208ENST00000569066 FXYD2P54710 66 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 PMAIP1Q13794 54 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 GUSBP11Q6P575 273 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 LHFPL1Q86WI0 220 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 WFDC11Q8NEX6 87 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 SPANXCQ9NY87 97 aa3.4□□□□□ -1.86
UBR1-208ENST00000569066 DLEC1Q9Y238 1755 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 PMVKQ15126 192 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 LYRM7Q5U5X0 104 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 OR11H6Q8NGC7 330 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 FGF13Q92913 245 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 PDCD1LG2Q9BQ51 273 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 WFDC6Q9BQY6 131 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 C16orf95Q9H693 158 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 KCNIP2Q9NS61 270 aa3.4□□□□□ -1.87
UBR1-208ENST00000569066 DUOX1Q9NRD9 1551 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 LY75O60449 1722 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 PATJQ8NI35 1801 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 CD7P09564 240 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 CISD3P0C7P0 127 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 ASIPP42127 132 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 TEN1Q86WV5 123 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 CLECL1Q8IZS7 167 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 ODF3Q96PU9 254 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 NUP98P52948 1817 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 LCTP09848 1927 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 NDUFB2O95178 105 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 EIF4EBP1Q13541 118 aaPredicted RBP3.39□□□□□ -1.87
UBR1-208ENST00000569066 CDK5R1Q15078 307 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 PRNTQ86SH4 94 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 OR51H1Q8NH63 302 aa3.39□□□□□ -1.87
UBR1-208ENST00000569066 UBR3Q6ZT12 1888 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 A0A0C4DFX4 3053 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 K7EMI3 77 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 NDUFS5O43920 106 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 IGKV3-11P04433 115 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 CRYGAP11844 174 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 CTLA4P16410 223 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 NPPCP23582 126 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 C15orf53Q8NAA6 179 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 C10orf105Q8TEF2 133 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 GNB1LQ9BYB4 327 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 TTTY10Q9BZA0 68 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 OTORQ9NRC9 128 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 HIGD1BQ9P298 99 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 PCDH15Q96QU1 1955 aa3.38□□□□□ -1.87
UBR1-208ENST00000569066 PLXNB3Q9ULL4 1909 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 TRAV8-1A0A0A6YYK1 113 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 MPV17P39210 176 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 MRPL2Q5T653 305 aaKnown RBP3.37□□□□□ -1.87
UBR1-208ENST00000569066 ANKRD29Q8N6D5 301 aa3.37□□□□□ -1.87
UBR1-208ENST00000569066 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms