RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 STOML3Q8TAV4 291 aa13.04□□□□□ -0.32
SYNGR3-205ENST00000568896 RNASE8Q8TDE3 154 aaKnown RBP13.04□□□□□ -0.32
SYNGR3-205ENST00000568896 TRAV10A0A0B4J240 114 aa13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 ZNF324O75467 553 aaPredicted RBP13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 TMEM263Q8WUH6 116 aaKnown RBP13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 TMED6Q8WW62 240 aa13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 PYGO2Q9BRQ0 406 aa13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
SYNGR3-205ENST00000568896 DYNC1H1Q14204 4646 aaKnown RBP13.02□□□□□ -0.32
SYNGR3-205ENST00000568896 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.33
SYNGR3-205ENST00000568896 A0A1W2PRE2 83 aa13.02□□□□□ -0.33
SYNGR3-205ENST00000568896 SUMO1P63165 101 aaKnown RBP13.02□□□□□ -0.33
SYNGR3-205ENST00000568896 ZNF493Q6ZR52 646 aa13.02□□□□□ -0.33
SYNGR3-205ENST00000568896 FAM213BQ8TBF2 198 aa13.02□□□□□ -0.33
SYNGR3-205ENST00000568896 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
SYNGR3-205ENST00000568896 TCRAP04437 139 aa13.01□□□□□ -0.33
SYNGR3-205ENST00000568896 UBE2G2P60604 165 aa13.01□□□□□ -0.33
SYNGR3-205ENST00000568896 CCDC28AQ8IWP9 274 aa13.01□□□□□ -0.33
SYNGR3-205ENST00000568896 C2CD4CQ8TF44 421 aa13.01□□□□□ -0.33
SYNGR3-205ENST00000568896 RYR1P21817 5038 aa13□□□□□ -0.33
SYNGR3-205ENST00000568896 DEFB131BA0A096LNP1 70 aa13□□□□□ -0.33
SYNGR3-205ENST00000568896 SERTM2A0A1B0GWG4 89 aa13□□□□□ -0.33
SYNGR3-205ENST00000568896 Q6ZQT7 251 aa13□□□□□ -0.33
SYNGR3-205ENST00000568896 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
SYNGR3-205ENST00000568896 EPDR1Q9UM22 224 aa13□□□□□ -0.33
SYNGR3-205ENST00000568896 FAM74A7A6NL05 159 aa12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 DAD1P61803 113 aa12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 APLNQ9ULZ1 77 aa12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 TIMM8BQ9Y5J9 83 aaPredicted RBP12.99□□□□□ -0.33
SYNGR3-205ENST00000568896 IGLL5B9A064 214 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 K7EQM0 130 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 ZFP69Q49AA0 526 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 C9orf62Q8N4C0 152 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 CYB561D1Q8N8Q1 229 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 SFT2D1Q8WV19 159 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 SGK494Q96LW2 274 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 ATG101Q9BSB4 218 aa12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
SYNGR3-205ENST00000568896 Q6AWC8 147 aa12.97□□□□□ -0.33
SYNGR3-205ENST00000568896 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
SYNGR3-205ENST00000568896 DNAH11Q96DT5 4516 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 IGHV1OR15-1A0A075B7D0 117 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 CBY3A6NI87 242 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 F6UZH7 168 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 RGS13O14921 159 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 IFNA7P01567 189 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 DEFB130BP0DP73 79 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 DEFB130AP0DP74 79 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 ANXA2RQ3ZCQ2 193 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 EIF5AL1Q6IS14 154 aaKnown RBP12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 TREM1Q9NP99 234 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 PSG8Q9UQ74 426 aa12.96□□□□□ -0.33
SYNGR3-205ENST00000568896 PKHD1P08F94 4074 aa12.96□□□□□ -0.34
SYNGR3-205ENST00000568896 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 A0A1B0GV50 99 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 SNURFLB1AK76 121 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 HTN3P15516 51 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 TCTAP57738 103 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 FLI1Q01543 452 aaPredicted RBP12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 C11orf72Q8NBR9 251 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 ZNF680Q8NEM1 530 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 NDFIP1Q9BT67 221 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 TP53TG3Q9ULZ0 132 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 ARL2-SNX15V9GYD0 113 aa12.95□□□□□ -0.34
SYNGR3-205ENST00000568896 PEX7O00628 323 aa12.94□□□□□ -0.34
SYNGR3-205ENST00000568896 RAB5CP51148 216 aa12.94□□□□□ -0.34
SYNGR3-205ENST00000568896 MUC21Q5SSG8 566 aa12.94□□□□□ -0.34
SYNGR3-205ENST00000568896 GSN-AS1Q9NRJ2 163 aa12.94□□□□□ -0.34
SYNGR3-205ENST00000568896 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 FBLL1A6NHQ2 334 aaKnown RBP12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 SULT1A2P50226 295 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 DAZ2Q13117 558 aaKnown RBP12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 CST9LP1Q5W188 147 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 PRNTQ86SH4 94 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 LINC00612Q8N6U2 182 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 HIST1H2BAQ96A08 127 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 LINC00479Q96M42 142 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
SYNGR3-205ENST00000568896 PAGE4O60829 102 aa12.92□□□□□ -0.34
SYNGR3-205ENST00000568896 ATP5G3P48201 142 aa12.92□□□□□ -0.34
SYNGR3-205ENST00000568896 TCL1AP56279 114 aa12.92□□□□□ -0.34
SYNGR3-205ENST00000568896 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
SYNGR3-205ENST00000568896 TRAV21A0A0B4J279 112 aa12.91□□□□□ -0.34
SYNGR3-205ENST00000568896 PPT1P50897 306 aa12.91□□□□□ -0.34
SYNGR3-205ENST00000568896 TCEAL7Q9BRU2 100 aa12.91□□□□□ -0.34
SYNGR3-205ENST00000568896 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
SYNGR3-205ENST00000568896 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
SYNGR3-205ENST00000568896 GAGE12BA1L429 117 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 GAGE7O76087 117 aa12.9□□□□□ -0.34
SYNGR3-205ENST00000568896 ATP5G1P05496 136 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms