RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LINC00467Q9BRT7 94 aa10□□□□□ -0.81
USB1-214ENST00000568848 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
USB1-214ENST00000568848 SLC25A31Q9H0C2 315 aa10□□□□□ -0.81
USB1-214ENST00000568848 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
USB1-214ENST00000568848 IGKV2-40A0A087WW87 121 aaPredicted RBP9.99□□□□□ -0.81
USB1-214ENST00000568848 IGLV5-52A0A0A0MRZ9 124 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 IGKV2D-40P01614 121 aaPredicted RBP9.99□□□□□ -0.81
USB1-214ENST00000568848 TCL1AP56279 114 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 ST6GAL2Q96JF0 529 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 AGPAT4-IT1Q9H0P7 198 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 LY96Q9Y6Y9 160 aa9.99□□□□□ -0.81
USB1-214ENST00000568848 ZNF415Q09FC8 603 aa9.98□□□□□ -0.81
USB1-214ENST00000568848 EIF4E3Q8N5X7 224 aaKnown RBP9.98□□□□□ -0.81
USB1-214ENST00000568848 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
USB1-214ENST00000568848 KLLNB2CW77 178 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 K7EQD1 137 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 MPDU1O75352 247 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 NDUFB4O95168 129 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 MPC2O95563 127 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 PYYP10082 97 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 Q8TAT8 98 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 ZNF479Q96JC4 524 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 VGLL1Q99990 258 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 HHLA3Q9XRX5 114 aa9.97□□□□□ -0.81
USB1-214ENST00000568848 LRCOL1A6NCL2 159 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
USB1-214ENST00000568848 WFDC2Q14508 124 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 MUC21Q5SSG8 566 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 NEGR1Q7Z3B1 354 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 NFE4Q86UQ8 179 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 BLNKQ8WV28 456 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
USB1-214ENST00000568848 PRO0255Q9UI72 69 aa9.96□□□□□ -0.82
USB1-214ENST00000568848 TRBV19A0A075B6N1 114 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 CRYGDP07320 174 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 HIST1H1EP10412 219 aaKnown RBP9.95□□□□□ -0.82
USB1-214ENST00000568848 GYPEP15421 78 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 GUK1Q16774 197 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 ANXA2RQ3ZCQ2 193 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 MIR17HGQ75NE6 70 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 SMIM3Q9BZL3 60 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 Q9HAA7 133 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 TMEM14CQ9P0S9 112 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 MBD2Q9UBB5 411 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 HSPB11Q9Y547 144 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 ALG5Q9Y673 324 aa9.95□□□□□ -0.82
USB1-214ENST00000568848 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 RGS13O14921 159 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 GPX1P07203 203 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 RPL12P30050 165 aaKnown RBP9.94□□□□□ -0.82
USB1-214ENST00000568848 SRIP30626 198 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 MRPL23Q16540 153 aaKnown RBP9.94□□□□□ -0.82
USB1-214ENST00000568848 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 FAM122CQ6P4D5 195 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 FAM167A-AS1Q96KT0 104 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 ATP5SQ99766 215 aa9.94□□□□□ -0.82
USB1-214ENST00000568848 IGHV1OR15-1A0A075B7D0 117 aa9.93□□□□□ -0.82
USB1-214ENST00000568848 LINC00477Q96M19 166 aa9.93□□□□□ -0.82
USB1-214ENST00000568848 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
USB1-214ENST00000568848 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
USB1-214ENST00000568848 IGHV3-16A0A0C4DH30 117 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 ZNF253O75346 499 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 OR10J4P0C629 311 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 PET100P0DJ07 73 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 EVI2AP22794 236 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 LINC00528Q8N1L1 170 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 Q8N3U1 123 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 ARPC5LQ9BPX5 153 aa9.92□□□□□ -0.82
USB1-214ENST00000568848 TRAV9-2A0A087WT02 112 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 C17orf112F2Z3M2 114 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 LECT2O14960 151 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 PSCAO43653 123 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 EIF3GO75821 320 aaKnown RBP eCLIP9.91□□□□□ -0.82
USB1-214ENST00000568848 NBEAP1P0C6P0 100 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 FFAR4Q5NUL3 377 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 Q8N814 137 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 TMEM70Q9BUB7 260 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 MRPL32Q9BYC8 188 aaKnown RBP9.91□□□□□ -0.82
USB1-214ENST00000568848 OR51M1Q9H341 326 aa9.91□□□□□ -0.82
USB1-214ENST00000568848 PKHD1L1Q86WI1 4243 aa9.9□□□□□ -0.82
USB1-214ENST00000568848 CRISP2P16562 243 aa9.9□□□□□ -0.82
USB1-214ENST00000568848 PDE6HQ13956 83 aa9.9□□□□□ -0.82
USB1-214ENST00000568848 IBA57Q5T440 356 aaKnown RBP9.9□□□□□ -0.82
USB1-214ENST00000568848 SCGB1C1Q8TD33 95 aa9.9□□□□□ -0.82
USB1-214ENST00000568848 FXYD5Q96DB9 178 aa9.9□□□□□ -0.82
USB1-214ENST00000568848 MRPL53Q96EL3 112 aaKnown RBP9.9□□□□□ -0.82
USB1-214ENST00000568848 PAXXQ9BUH6 204 aa9.9□□□□□ -0.82
USB1-214ENST00000568848 PTTG1O95997 202 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 IGHV3-30P01768 117 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 IGHV3-33P01772 117 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 IGHV3-30-3P0DP02 117 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 IGHV3-30-5P0DP03 117 aa9.89□□□□□ -0.83
USB1-214ENST00000568848 PHYHIPLQ96FC7 376 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms