RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 ZNF331Q9NQX6 463 aaPredicted RBP3.7□□□□□ -1.82
CDH13-211ENST00000568770 MTFP1Q9UDX5 166 aa3.7□□□□□ -1.82
CDH13-211ENST00000568770 RAB26Q9ULW5 256 aa3.7□□□□□ -1.82
CDH13-211ENST00000568770 HIGD1AQ9Y241 93 aa3.7□□□□□ -1.82
CDH13-211ENST00000568770 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
CDH13-211ENST00000568770 A0A0B4J2A0 478 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 H3BTX0 84 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
CDH13-211ENST00000568770 IL5P05113 134 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 LINC00869P0C866 280 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 MT3P25713 68 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 LEPP41159 167 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 AKR1C1Q04828 323 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 SURF2Q15527 256 aaPredicted RBP3.69□□□□□ -1.82
CDH13-211ENST00000568770 LINC01620Q4KN68 170 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 LCN15Q6UWW0 184 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 CYP2G1PQ6ZSU1 146 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 ACOT7LQ6ZUV0 252 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 LRTM2Q8N967 370 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 VGLL1Q99990 258 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 MRPL32Q9BYC8 188 aaKnown RBP3.69□□□□□ -1.82
CDH13-211ENST00000568770 ARL6Q9H0F7 186 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 Q9HAA7 133 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 MRPL16Q9NX20 251 aaKnown RBP3.69□□□□□ -1.82
CDH13-211ENST00000568770 SHPKQ9UHJ6 478 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 GPR132Q9UNW8 380 aa3.69□□□□□ -1.82
CDH13-211ENST00000568770 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.68□□□□□ -1.82
CDH13-211ENST00000568770 TRAV5A0A0B4J249 113 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 TRGV4A0A0C4DH28 118 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 C7orf71A4D174 169 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 IBA57-AS1B1ANH7 110 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 FAM25AB3EWG3 89 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 FAM25CB3EWG5 89 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 FAM25GB3EWG6 89 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 SLC17A3O00476 420 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 PITX3O75364 302 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 SLC25A5P05141 298 aaKnown RBP3.68□□□□□ -1.82
CDH13-211ENST00000568770 CXCL2P19875 107 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 TCL1AP56279 114 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 CD300CQ08708 224 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 BTN1A1Q13410 526 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 WFDC2Q14508 124 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 PATE2Q6UY27 113 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 EIF4E3Q8N5X7 224 aaKnown RBP3.68□□□□□ -1.82
CDH13-211ENST00000568770 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
CDH13-211ENST00000568770 ODF3Q96PU9 254 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 SLC50A1Q9BRV3 221 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 CHAC1Q9BUX1 264 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 TP53TG3Q9ULZ0 132 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 KCNIP3Q9Y2W7 256 aa3.68□□□□□ -1.82
CDH13-211ENST00000568770 SMCO3A2RU48 225 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 DISC1C4P0D8 188 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 H3BP45 60 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 WRBO00258 174 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 LECT2O14960 151 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 RS1O15537 224 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 ORM1P02763 201 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 SFTA3P0C7M3 94 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 RNASE4P34096 147 aaKnown RBP3.67□□□□□ -1.82
CDH13-211ENST00000568770 ASIPP42127 132 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 HNRNPA3P51991 378 aaKnown RBP3.67□□□□□ -1.82
CDH13-211ENST00000568770 PLP1P60201 277 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 NCS1P62166 190 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 SELENOTP62341 195 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 LINC01556Q5JQF7 62 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 SPANXN5Q5MJ07 72 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 IBA57Q5T440 356 aaKnown RBP3.67□□□□□ -1.82
CDH13-211ENST00000568770 Q6ZQT7 251 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 LINC00305Q7Z4B0 112 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 OR51S1Q8NGJ8 323 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 CIRBP-AS1Q8TBR5 109 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 BLNKQ8WV28 456 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 YIPF6Q96EC8 236 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 ARV1Q9H2C2 271 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 EXTL2Q9UBQ6 330 aa3.67□□□□□ -1.82
CDH13-211ENST00000568770 LOC100131303A0A0U1RQF7 123 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 KLLNB2CW77 178 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 C9JCJ5 164 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 H3BQ15 152 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 SYNGR2O43760 224 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 MPDU1O75352 247 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 MED6O75586 246 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 CCNKO75909 580 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGLV2-8P01709 118 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGHV3-33P01772 117 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGLC2P0DOY2 106 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 SRPXP78539 464 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 SSBP1Q04837 148 aaKnown RBP3.66□□□□□ -1.82
CDH13-211ENST00000568770 ERCC8Q13216 396 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 S100A7AQ86SG5 101 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 BPIFA4PQ86YQ2 179 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 CLVS1Q8IUQ0 354 aaPredicted RBP3.66□□□□□ -1.82
CDH13-211ENST00000568770 IQCF2Q8IXL9 164 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 FAM19A4Q96LR4 140 aa3.66□□□□□ -1.82
CDH13-211ENST00000568770 CIB3Q96Q77 187 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms