RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 ZFAND3Q9H8U3 227 aa16.61■□□□□ 0.25
DENND4A-208ENST00000568515 MRPL35Q9NZE8 188 aaKnown RBP16.61■□□□□ 0.25
DENND4A-208ENST00000568515 RAB9AP51151 201 aa16.6■□□□□ 0.25
DENND4A-208ENST00000568515 SRSF1Q07955 248 aaKnown RBP eCLIP16.6■□□□□ 0.25
DENND4A-208ENST00000568515 MYOZ3Q8TDC0 251 aa16.6■□□□□ 0.25
DENND4A-208ENST00000568515 AGPAT4-IT1Q9H0P7 198 aa16.6■□□□□ 0.25
DENND4A-208ENST00000568515 RPL24P83731 157 aaKnown RBP16.6■□□□□ 0.25
DENND4A-208ENST00000568515 ZNF502Q8TBZ5 544 aa16.6■□□□□ 0.25
DENND4A-208ENST00000568515 SLC50A1Q9BRV3 221 aa16.6■□□□□ 0.25
DENND4A-208ENST00000568515 PRSS47A8MTI9 375 aa16.59■□□□□ 0.25
DENND4A-208ENST00000568515 GRNP28799 593 aaKnown RBP16.59■□□□□ 0.25
DENND4A-208ENST00000568515 LAGE3Q14657 143 aa16.59■□□□□ 0.25
DENND4A-208ENST00000568515 C15orf32Q32M92 178 aa16.59■□□□□ 0.25
DENND4A-208ENST00000568515 NRACQ8N912 160 aa16.59■□□□□ 0.25
DENND4A-208ENST00000568515 DCHS2Q6V1P9 2916 aa16.59■□□□□ 0.25
DENND4A-208ENST00000568515 LRBAP50851 2863 aa16.58■□□□□ 0.25
DENND4A-208ENST00000568515 IGHV3-66A0A0C4DH42 116 aa16.58■□□□□ 0.25
DENND4A-208ENST00000568515 OOSP1A8MZH6 123 aa16.58■□□□□ 0.25
DENND4A-208ENST00000568515 CLEC3BP05452 202 aa16.58■□□□□ 0.25
DENND4A-208ENST00000568515 MAPKAPK5-AS1Q8N8E1 139 aa16.58■□□□□ 0.25
DENND4A-208ENST00000568515 FAM90A27PA6NNH2 459 aa16.58■□□□□ 0.24
DENND4A-208ENST00000568515 TRAV26-2A0A0B4J265 109 aa16.57■□□□□ 0.24
DENND4A-208ENST00000568515 TEX48A0A1B0GUV7 120 aa16.57■□□□□ 0.24
DENND4A-208ENST00000568515 Q8N9W7 124 aa16.57■□□□□ 0.24
DENND4A-208ENST00000568515 IGHV7-4-1A0A0J9YVY3 117 aa16.57■□□□□ 0.24
DENND4A-208ENST00000568515 GOSR1O95249 250 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 FAM110DQ8TAY7 271 aaPredicted RBP16.56■□□□□ 0.24
DENND4A-208ENST00000568515 UFC1Q9Y3C8 167 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 MSRB2Q9Y3D2 182 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 A0A087WX48 190 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 CLPSL1A2RUU4 121 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 E9PLD3 99 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 K7EMI3 77 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 MINOS1Q5TGZ0 78 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 MINOS1-NBL1R4GNA1 71 aa16.56■□□□□ 0.24
DENND4A-208ENST00000568515 ZNF292O60281 2723 aa16.55■□□□□ 0.24
DENND4A-208ENST00000568515 TMEM78Q5T7P6 136 aa16.55■□□□□ 0.24
DENND4A-208ENST00000568515 C1orf122Q6ZSJ8 110 aa16.55■□□□□ 0.24
DENND4A-208ENST00000568515 ANKHD1Q8IWZ3 2542 aaKnown RBP16.55■□□□□ 0.24
DENND4A-208ENST00000568515 IGHV3OR16-13A0A075B7E8 117 aa16.55■□□□□ 0.24
DENND4A-208ENST00000568515 IGHV3-74A0A0B4J1X5 117 aa16.55■□□□□ 0.24
DENND4A-208ENST00000568515 IGLL5B9A064 214 aa16.54■□□□□ 0.24
DENND4A-208ENST00000568515 TAL2Q16559 108 aa16.54■□□□□ 0.24
DENND4A-208ENST00000568515 ECSCRQ19T08 205 aa16.54■□□□□ 0.24
DENND4A-208ENST00000568515 TRAV8-2A0A0B4J237 113 aa16.54■□□□□ 0.24
DENND4A-208ENST00000568515 EFNA4P52798 201 aa16.53■□□□□ 0.24
DENND4A-208ENST00000568515 IGHV4-4A0A075B6R2 117 aa16.53■□□□□ 0.24
DENND4A-208ENST00000568515 SPANXN1Q5VSR9 72 aa16.53■□□□□ 0.24
DENND4A-208ENST00000568515 FOXI2Q6ZQN5 318 aa16.53■□□□□ 0.24
DENND4A-208ENST00000568515 RIF1Q5UIP0 2472 aaKnown RBP16.52■□□□□ 0.24
DENND4A-208ENST00000568515 PLNP26678 52 aa16.52■□□□□ 0.24
DENND4A-208ENST00000568515 C12orf74Q32Q52 190 aa16.52■□□□□ 0.24
DENND4A-208ENST00000568515 CLEC19AQ6UXS0 136 aa16.52■□□□□ 0.24
DENND4A-208ENST00000568515 Q6ZQT7 251 aa16.52■□□□□ 0.23
DENND4A-208ENST00000568515 AGRNO00468 2067 aa16.52■□□□□ 0.23
DENND4A-208ENST00000568515 IGHV3-49A0A0A0MS15 119 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 KLK9Q2XQG4 91 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 FBXL19-AS1Q494R0 122 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 MRPL53Q96EL3 112 aaKnown RBP16.51■□□□□ 0.23
DENND4A-208ENST00000568515 ZNF479Q96JC4 524 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 CCDC140Q96MF4 163 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 KLK9Q9UKQ9 250 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 C8orf86Q6ZUL3 223 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 HIF1ANQ9NWT6 349 aa16.51■□□□□ 0.23
DENND4A-208ENST00000568515 F8W1H4 67 aa16.5■□□□□ 0.23
DENND4A-208ENST00000568515 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.5■□□□□ 0.23
DENND4A-208ENST00000568515 ATP6V0E1O15342 81 aa16.5■□□□□ 0.23
DENND4A-208ENST00000568515 C9orf47Q6ZRZ4 202 aa16.5■□□□□ 0.23
DENND4A-208ENST00000568515 HIST1H4GQ99525 98 aa16.5■□□□□ 0.23
DENND4A-208ENST00000568515 ZNF207O43670 478 aaKnown RBP16.49■□□□□ 0.23
DENND4A-208ENST00000568515 ZFP36P26651 326 aaKnown RBP16.49■□□□□ 0.23
DENND4A-208ENST00000568515 WFDC2Q14508 124 aa16.49■□□□□ 0.23
DENND4A-208ENST00000568515 METTL26Q96S19 204 aa16.49■□□□□ 0.23
DENND4A-208ENST00000568515 H7C1H1 209 aa16.48■□□□□ 0.23
DENND4A-208ENST00000568515 MRAP2Q96G30 205 aa16.48■□□□□ 0.23
DENND4A-208ENST00000568515 TRAV12-1A0A0B4J245 112 aa16.48■□□□□ 0.23
DENND4A-208ENST00000568515 H3BVH4 76 aa16.48■□□□□ 0.23
DENND4A-208ENST00000568515 SMIM2Q9BVW6 85 aa16.48■□□□□ 0.23
DENND4A-208ENST00000568515 SPANXB1Q9NS25 103 aaPredicted RBP16.48■□□□□ 0.23
DENND4A-208ENST00000568515 F8VRH5 84 aa16.47■□□□□ 0.23
DENND4A-208ENST00000568515 SAMD13Q5VXD3 122 aa16.47■□□□□ 0.23
DENND4A-208ENST00000568515 G3V318 75 aa16.47■□□□□ 0.23
DENND4A-208ENST00000568515 C11orf71Q6IPW1 123 aa16.47■□□□□ 0.23
DENND4A-208ENST00000568515 TRBV7-3A0A075B6L6 115 aa16.46■□□□□ 0.23
DENND4A-208ENST00000568515 EEF1AKMT3Q96AZ1 226 aa16.46■□□□□ 0.23
DENND4A-208ENST00000568515 H3BMG7 143 aa16.46■□□□□ 0.23
DENND4A-208ENST00000568515 SIRPDQ9H106 197 aa16.46■□□□□ 0.23
DENND4A-208ENST00000568515 LINC01548A6NM66 108 aa16.45■□□□□ 0.22
DENND4A-208ENST00000568515 U3KQE9 123 aa16.45■□□□□ 0.22
DENND4A-208ENST00000568515 TLN1Q9Y490 2541 aaKnown RBP16.45■□□□□ 0.22
DENND4A-208ENST00000568515 PRR9Q5T870 116 aa16.44■□□□□ 0.22
DENND4A-208ENST00000568515 SCGB3A1Q96QR1 104 aa16.44■□□□□ 0.22
DENND4A-208ENST00000568515 CHTOPQ9Y3Y2 248 aaKnown RBP16.44■□□□□ 0.22
DENND4A-208ENST00000568515 CACNA1BQ00975 2339 aa16.44■□□□□ 0.22
DENND4A-208ENST00000568515 MYMXA0A1B0GTQ4 84 aa16.44■□□□□ 0.22
DENND4A-208ENST00000568515 RRN3P1Q2M238 152 aa16.44■□□□□ 0.22
DENND4A-208ENST00000568515 KLK15Q9H2R5 256 aa16.44■□□□□ 0.22
DENND4A-208ENST00000568515 TRBV7-1A0A0A6YYK4 115 aa16.43■□□□□ 0.22
DENND4A-208ENST00000568515 OR11H12B2RN74 326 aa16.43■□□□□ 0.22
DENND4A-208ENST00000568515 LINC01619G3V211 115 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms