RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 OR5I1Q13606 314 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 Q6ZTI0 123 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 CMTM2Q8TAZ6 248 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 TMEM263Q8WUH6 116 aaKnown RBP6.68□□□□□ -1.34
SF3B3-211ENST00000568291 TVP23CQ96ET8 276 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 PSMG3Q9BT73 122 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-211ENST00000568291 OTORQ9NRC9 128 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 IGLV2-18A0A075B6J9 118 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 A0A0J9YY99 117 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 SNURFLB1AK76 121 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 F6UZH7 168 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 RGS13O14921 159 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 NUDT3O95989 172 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 P0DMU3 169 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 FAM231AP0DMU4 169 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 FAM231CP0DMU5 169 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 CRISP2P16562 243 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 HOXA5P20719 270 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 FHITP49789 147 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 UBE2G2P60604 165 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
SF3B3-211ENST00000568291 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 ZNF493Q6ZR52 646 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 LYPD1Q8N2G4 141 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 ASB13Q8WXK3 278 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 C20orf144Q9BQM9 153 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 PYGO2Q9BRQ0 406 aa6.67□□□□□ -1.34
SF3B3-211ENST00000568291 ACTR3CQ9C0K3 210 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-211ENST00000568291 IGHV1OR15-1A0A075B7D0 117 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 TRGV1A0A0A0MS02 117 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 GNRH2O43555 120 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 ATP5G1P05496 136 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 ATP5G3P48201 142 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 SERF2P84101 59 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 EIF4E3Q8N5X7 224 aaKnown RBP6.66□□□□□ -1.34
SF3B3-211ENST00000568291 POM121L12Q8N7R1 296 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 RXFP4Q8TDU9 374 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 GNPNAT1Q96EK6 184 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-211ENST00000568291 ST6GAL2Q96JF0 529 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 LINC00479Q96M42 142 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 MRPL16Q9NX20 251 aaKnown RBP6.66□□□□□ -1.34
SF3B3-211ENST00000568291 MDFICQ9P1T7 246 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 NAGKQ9UJ70 344 aa6.66□□□□□ -1.34
SF3B3-211ENST00000568291 hCG_2014768A0A024R1R8 64 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 TRAV34A0A0B4J273 112 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 A0A1B0GV50 99 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 GGTLC3B5MD39 225 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 RTL8CO15255 209 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 CXorf1O96002 111 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 MBP02144 154 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 MED14OSP0DP75 135 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 UBE2DNLQ8IWF7 75 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 C8orf49Q96NF6 230 aa6.65□□□□□ -1.34
SF3B3-211ENST00000568291 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 TRAV26-1A0A087WT03 109 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 RBAKDNA6NC62 111 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 TCRAP04437 139 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-211ENST00000568291 TMEM183BQ1AE95 376 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 ANXA2RQ3ZCQ2 193 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 FAM74A1Q5RGS3 127 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 AKR1C8PQ5T2L2 129 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 TMEM183AQ8IXX5 376 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 LINC00612Q8N6U2 182 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 ARPC5LQ9BPX5 153 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 TREM1Q9NP99 234 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 EPDR1Q9UM22 224 aa6.64□□□□□ -1.35
SF3B3-211ENST00000568291 CTXND1A0A1B0GTU2 59 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 TAAR5O14804 337 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 IGLV2-11P01706 119 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 NMBP08949 121 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 TCL1AP56279 114 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 TNP2Q05952 138 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 DAZ2Q13117 558 aaKnown RBP6.63□□□□□ -1.35
SF3B3-211ENST00000568291 LGALS9BQ3B8N2 356 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 SUN5Q8TC36 379 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 LINC00467Q9BRT7 94 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF471Q9BX82 626 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-211ENST00000568291 C11orf21Q9P2W6 132 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 PSG8Q9UQ74 426 aa6.63□□□□□ -1.35
SF3B3-211ENST00000568291 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 MAP1LC3B2A6NCE7 125 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 SPINK4O60575 86 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 IFNA7P01567 189 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 Q6AWC8 147 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 FAM159AQ6UWV7 190 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 TMUB2Q71RG4 321 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 TMEM75Q8N9X5 138 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 C5orf17Q8NAS9 161 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF680Q8NEM1 530 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 FAM210BQ96KR6 192 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms