RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 AKR1C3P42330 323 aa12.98□□□□□ -0.33
COMMD4-222ENST00000568034 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
COMMD4-222ENST00000568034 C8orf49Q96NF6 230 aa12.98□□□□□ -0.33
COMMD4-222ENST00000568034 VAX2Q9UIW0 290 aa12.98□□□□□ -0.33
COMMD4-222ENST00000568034 TRBV6-1A0A0K0K1D8 114 aa12.97□□□□□ -0.33
COMMD4-222ENST00000568034 GPX1P07203 203 aa12.97□□□□□ -0.33
COMMD4-222ENST00000568034 MIFP14174 115 aa12.97□□□□□ -0.33
COMMD4-222ENST00000568034 RNASE4P34096 147 aaKnown RBP12.97□□□□□ -0.33
COMMD4-222ENST00000568034 TAGLN2P37802 199 aaKnown RBP12.97□□□□□ -0.33
COMMD4-222ENST00000568034 TMEM183BQ1AE95 376 aa12.97□□□□□ -0.33
COMMD4-222ENST00000568034 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
COMMD4-222ENST00000568034 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
COMMD4-222ENST00000568034 A0A0J9YWU9 116 aa12.96□□□□□ -0.33
COMMD4-222ENST00000568034 H7BYZ3 331 aa12.96□□□□□ -0.33
COMMD4-222ENST00000568034 ZNF506Q5JVG8 444 aa12.96□□□□□ -0.33
COMMD4-222ENST00000568034 Q6AWC8 147 aa12.96□□□□□ -0.33
COMMD4-222ENST00000568034 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
COMMD4-222ENST00000568034 C11orf68Q9H3H3 251 aaKnown RBP12.96□□□□□ -0.33
COMMD4-222ENST00000568034 RBFOX3A6NFN3 312 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 ZNF705GA8MUZ8 300 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-222ENST00000568034 DEFB4AO15263 64 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-222ENST00000568034 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 LINC01587Q99440 93 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 NDFIP1Q9BT67 221 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 TMEM208Q9BTX3 173 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 DERL1Q9BUN8 251 aa12.95□□□□□ -0.34
COMMD4-222ENST00000568034 PDE6DO43924 150 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 LTAP01374 205 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 AZU1P20160 251 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 TAS2R60P59551 318 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 TOR2AQ5JU69 321 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 NIPSNAP3BQ9BS92 247 aa12.94□□□□□ -0.34
COMMD4-222ENST00000568034 PLAC8L1A1L4L8 177 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 RPL35P42766 123 aaKnown RBP12.93□□□□□ -0.34
COMMD4-222ENST00000568034 UBE2G1P62253 170 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 RRN3P1Q2M238 152 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 ZNF767PQ75MW2 155 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 LINC00467Q9BRT7 94 aa12.93□□□□□ -0.34
COMMD4-222ENST00000568034 S100A9P06702 114 aaKnown RBP12.92□□□□□ -0.34
COMMD4-222ENST00000568034 ZFP30Q9Y2G7 519 aa12.92□□□□□ -0.34
COMMD4-222ENST00000568034 GCGP01275 180 aa12.91□□□□□ -0.34
COMMD4-222ENST00000568034 SMUG1Q53HV7 270 aa12.91□□□□□ -0.34
COMMD4-222ENST00000568034 RNASE8Q8TDE3 154 aaKnown RBP12.91□□□□□ -0.34
COMMD4-222ENST00000568034 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
COMMD4-222ENST00000568034 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
COMMD4-222ENST00000568034 TRAV21A0A0B4J279 112 aa12.9□□□□□ -0.34
COMMD4-222ENST00000568034 NDUFS6O75380 124 aaKnown RBP12.9□□□□□ -0.34
COMMD4-222ENST00000568034 CRIP1P50238 77 aa12.9□□□□□ -0.34
COMMD4-222ENST00000568034 CLLU1Q5K131 121 aa12.9□□□□□ -0.34
COMMD4-222ENST00000568034 TMEM183AQ8IXX5 376 aa12.9□□□□□ -0.34
COMMD4-222ENST00000568034 MED9Q9NWA0 146 aa12.9□□□□□ -0.34
COMMD4-222ENST00000568034 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
COMMD4-222ENST00000568034 DYNC2H1Q8NCM8 4307 aaKnown RBP12.89□□□□□ -0.35
COMMD4-222ENST00000568034 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 TMEM250H0YL14 139 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 PFN1P07737 140 aaKnown RBP12.89□□□□□ -0.35
COMMD4-222ENST00000568034 HTN1P15515 57 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 BAGE2Q86Y30 109 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 EIF4E3Q8N5X7 224 aaKnown RBP12.89□□□□□ -0.35
COMMD4-222ENST00000568034 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
COMMD4-222ENST00000568034 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
COMMD4-222ENST00000568034 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
COMMD4-222ENST00000568034 RAB19A4D1S5 217 aa12.88□□□□□ -0.35
COMMD4-222ENST00000568034 IGLV2-8P01709 118 aa12.88□□□□□ -0.35
COMMD4-222ENST00000568034 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
COMMD4-222ENST00000568034 TDRG1Q3Y452 100 aa12.88□□□□□ -0.35
COMMD4-222ENST00000568034 CENPWQ5EE01 88 aa12.88□□□□□ -0.35
COMMD4-222ENST00000568034 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
COMMD4-222ENST00000568034 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
COMMD4-222ENST00000568034 TMEM189A5PLL7 270 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 C9JQL5 133 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 RGS13O14921 159 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
COMMD4-222ENST00000568034 RAB14P61106 215 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 ZNF493Q6ZR52 646 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
COMMD4-222ENST00000568034 STARD9Q9P2P6 4700 aa12.86□□□□□ -0.35
COMMD4-222ENST00000568034 EMP1P54849 157 aa12.86□□□□□ -0.35
COMMD4-222ENST00000568034 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
COMMD4-222ENST00000568034 PARLQ9H300 379 aa12.86□□□□□ -0.35
COMMD4-222ENST00000568034 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
COMMD4-222ENST00000568034 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
COMMD4-222ENST00000568034 CBY3A6NI87 242 aa12.85□□□□□ -0.35
COMMD4-222ENST00000568034 SH2D1AO60880 128 aa12.85□□□□□ -0.35
COMMD4-222ENST00000568034 FAM159AQ6UWV7 190 aa12.85□□□□□ -0.35
COMMD4-222ENST00000568034 IGKV3D-20A0A0C4DH25 116 aa12.84□□□□□ -0.35
COMMD4-222ENST00000568034 PGPEP1LA6NFU8 196 aa12.84□□□□□ -0.35
COMMD4-222ENST00000568034 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
COMMD4-222ENST00000568034 C9JCJ5 164 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms