RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 IGLV2-11P01706 119 aa12.3□□□□□ -0.44
COMMD4-220ENST00000567720 HTN1P15515 57 aa12.3□□□□□ -0.44
COMMD4-220ENST00000567720 ATP5G3P48201 142 aa12.3□□□□□ -0.44
COMMD4-220ENST00000567720 RAB5CP51148 216 aa12.3□□□□□ -0.44
COMMD4-220ENST00000567720 FAM222AQ5U5X8 452 aa12.3□□□□□ -0.44
COMMD4-220ENST00000567720 Q6ZTC4 211 aa12.3□□□□□ -0.44
COMMD4-220ENST00000567720 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
COMMD4-220ENST00000567720 NUPR2A6NF83 97 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 F6UZH7 168 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 PEX7O00628 323 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 C12orf74Q32Q52 190 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 CCDC28AQ8IWP9 274 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 TMEM75Q8N9X5 138 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 PHLDA1Q8WV24 401 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-220ENST00000567720 C16orf74Q96GX8 76 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 PYGO2Q9BRQ0 406 aa12.29□□□□□ -0.44
COMMD4-220ENST00000567720 PAGE4O60829 102 aa12.28□□□□□ -0.44
COMMD4-220ENST00000567720 IFNA7P01567 189 aa12.28□□□□□ -0.44
COMMD4-220ENST00000567720 NKX6-2Q9C056 277 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-220ENST00000567720 RYR3Q15413 4870 aa12.27□□□□□ -0.44
COMMD4-220ENST00000567720 K7EQM0 130 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 FLI1Q01543 452 aaPredicted RBP12.27□□□□□ -0.45
COMMD4-220ENST00000567720 CST9LP1Q5W188 147 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 Q6AWC8 147 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 CEMP1Q6PRD7 247 aaPredicted RBP12.27□□□□□ -0.45
COMMD4-220ENST00000567720 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 Q86TA4 180 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 LINC00479Q96M42 142 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 PSG8Q9UQ74 426 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 RYR2Q92736 4967 aa12.27□□□□□ -0.45
COMMD4-220ENST00000567720 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 CCL20P78556 96 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 ZNF493Q6ZR52 646 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 HIST1H2BAQ96A08 127 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 C8orf49Q96NF6 230 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 TREM1Q9NP99 234 aa12.26□□□□□ -0.45
COMMD4-220ENST00000567720 PRNTQ86SH4 94 aa12.25□□□□□ -0.45
COMMD4-220ENST00000567720 EIF4E3Q8N5X7 224 aaKnown RBP12.25□□□□□ -0.45
COMMD4-220ENST00000567720 C11orf72Q8NBR9 251 aa12.25□□□□□ -0.45
COMMD4-220ENST00000567720 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
COMMD4-220ENST00000567720 NDFIP1Q9BT67 221 aa12.25□□□□□ -0.45
COMMD4-220ENST00000567720 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
COMMD4-220ENST00000567720 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
COMMD4-220ENST00000567720 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
COMMD4-220ENST00000567720 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
COMMD4-220ENST00000567720 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
COMMD4-220ENST00000567720 TRAV10A0A0B4J240 114 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 FBLL1A6NHQ2 334 aaKnown RBP12.23□□□□□ -0.45
COMMD4-220ENST00000567720 CBY3A6NI87 242 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 C11orf94C9JXX5 98 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 RGS13O14921 159 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 PPT1P50897 306 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-220ENST00000567720 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 NOP10Q9NPE3 64 aaKnown RBP12.23□□□□□ -0.45
COMMD4-220ENST00000567720 MANBALQ9NQG1 85 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 TIMM8BQ9Y5J9 83 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-220ENST00000567720 HYDINQ4G0P3 5121 aa12.23□□□□□ -0.45
COMMD4-220ENST00000567720 DAD1P61803 113 aa12.22□□□□□ -0.45
COMMD4-220ENST00000567720 VPS13DQ5THJ4 4388 aa12.22□□□□□ -0.45
COMMD4-220ENST00000567720 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 GCGP01275 180 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 AKR1C3P42330 323 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 C2CD4CQ8TF44 421 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 FMC1Q96HJ9 113 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 KLK5Q9Y337 293 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-220ENST00000567720 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.45
COMMD4-220ENST00000567720 DEFB131BA0A096LNP1 70 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 TCL1AP56279 114 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 SMUG1Q53HV7 270 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 IBA57Q5T440 356 aaKnown RBP12.2□□□□□ -0.46
COMMD4-220ENST00000567720 LINC00612Q8N6U2 182 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
COMMD4-220ENST00000567720 UBE2G1P62253 170 aa12.19□□□□□ -0.46
COMMD4-220ENST00000567720 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
COMMD4-220ENST00000567720 TMEM183BQ1AE95 376 aa12.19□□□□□ -0.46
COMMD4-220ENST00000567720 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
COMMD4-220ENST00000567720 SAPCD1Q5SSQ6 148 aa12.19□□□□□ -0.46
COMMD4-220ENST00000567720 TRBV6-1A0A0K0K1D8 114 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 LTAP01374 205 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
COMMD4-220ENST00000567720 BCL2P10415 239 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 HTN3P15516 51 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 FAM159AQ6UWV7 190 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 Q6ZTI0 123 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 TMEM183AQ8IXX5 376 aa12.18□□□□□ -0.46
COMMD4-220ENST00000567720 C11orf52Q96A22 123 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms