RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 LENEPQ9Y5L5 61 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 TRBV7-9A0A0J9YWB2 115 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 KNCNA6PVL3 124 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 TMEM78Q5T7P6 136 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 C9orf47Q6ZRZ4 202 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 TMEM183AQ8IXX5 376 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 RNF182Q8N6D2 247 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 ISOC2Q96AB3 205 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
CLK3-218ENST00000566926 TRAV34A0A0B4J273 112 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 CXorf65A6NEN9 183 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 GCGP01275 180 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 ZFAND6Q6FIF0 208 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 COX8CQ7Z4L0 72 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 C15orf54Q8N8G6 183 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 OCC1Q8TAD7 63 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 LINC00479Q96M42 142 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 MLST8Q9BVC4 326 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 C1QTNF4Q9BXJ3 329 aa9.82□□□□□ -0.84
CLK3-218ENST00000566926 IGKV2-40A0A087WW87 121 aaPredicted RBP9.81□□□□□ -0.84
CLK3-218ENST00000566926 A0A0J9YWU9 116 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 IGKV2D-40P01614 121 aaPredicted RBP9.81□□□□□ -0.84
CLK3-218ENST00000566926 CT45A10P0DMU9 189 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 IGFL4Q6B9Z1 124 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 OR8A1Q8NGG7 326 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 OR11H2Q8NH07 326 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 SFRP2Q96HF1 295 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 RPS10P5Q9NQ39 176 aa9.81□□□□□ -0.84
CLK3-218ENST00000566926 TRAV8-1A0A0A6YYK1 113 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 ZNF705FA8MVS1 300 aaPredicted RBP9.8□□□□□ -0.84
CLK3-218ENST00000566926 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 H3BMM0 161 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 DUSP14O95147 198 aaKnown RBP9.8□□□□□ -0.84
CLK3-218ENST00000566926 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 HLA-DMBP28068 263 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 ZNF138P52744 262 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 FOXI2Q6ZQN5 318 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 C20orf173Q96LM9 149 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 SAV1Q9H4B6 383 aaPredicted RBP9.8□□□□□ -0.84
CLK3-218ENST00000566926 OSTCQ9NRP0 149 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 SMCO4Q9NRQ5 59 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
CLK3-218ENST00000566926 IGLV2-8P01709 118 aa9.79□□□□□ -0.84
CLK3-218ENST00000566926 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
CLK3-218ENST00000566926 ERVFC1-1P60608 527 aa9.79□□□□□ -0.84
CLK3-218ENST00000566926 RNF212Q495C1 297 aa9.79□□□□□ -0.84
CLK3-218ENST00000566926 CLUHP3Q96NS8 147 aa9.79□□□□□ -0.84
CLK3-218ENST00000566926 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
CLK3-218ENST00000566926 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 H7BYZ3 331 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 K7EN84 100 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 SMUG1Q53HV7 270 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
CLK3-218ENST00000566926 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 VGLL1Q99990 258 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
CLK3-218ENST00000566926 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
CLK3-218ENST00000566926 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
CLK3-218ENST00000566926 CT83Q5H943 113 aa9.77□□□□□ -0.85
CLK3-218ENST00000566926 IBA57Q5T440 356 aaKnown RBP9.77□□□□□ -0.85
CLK3-218ENST00000566926 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
CLK3-218ENST00000566926 OR4B1Q8NGF8 309 aa9.77□□□□□ -0.85
CLK3-218ENST00000566926 SGK494Q96LW2 274 aa9.77□□□□□ -0.85
CLK3-218ENST00000566926 A0A0J9YX75 114 aa9.76□□□□□ -0.85
CLK3-218ENST00000566926 GIG44P09565 113 aaPredicted RBP9.76□□□□□ -0.85
CLK3-218ENST00000566926 MIFP14174 115 aa9.76□□□□□ -0.85
CLK3-218ENST00000566926 S100PP25815 95 aa9.76□□□□□ -0.85
CLK3-218ENST00000566926 TSPOP30536 169 aa9.76□□□□□ -0.85
CLK3-218ENST00000566926 KCNIP4Q6PIL6 250 aa9.76□□□□□ -0.85
CLK3-218ENST00000566926 NHLRC2Q8NBF2 726 aa9.76□□□□□ -0.85
CLK3-218ENST00000566926 TENM2Q9NT68 2774 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 P01737 135 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 CRISP2P16562 243 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 LEPP41159 167 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
CLK3-218ENST00000566926 OR5I1Q13606 314 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 GDF5OSQ5U4N7 250 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 Q8TAT8 98 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
CLK3-218ENST00000566926 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
CLK3-218ENST00000566926 TRAV9-1A0A075B6T8 112 aa9.74□□□□□ -0.85
CLK3-218ENST00000566926 XKRY2A2RUG3 117 aa9.74□□□□□ -0.85
CLK3-218ENST00000566926 C19orf71A6NCJ1 209 aa9.74□□□□□ -0.85
CLK3-218ENST00000566926 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
CLK3-218ENST00000566926 IGKV3-20P01619 116 aa9.74□□□□□ -0.85
CLK3-218ENST00000566926 ERCC8Q13216 396 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms