RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 LENEPQ9Y5L5 61 aa9.86□□□□□ -0.83
HERPUD1-210ENST00000565966 ALMS1Q8TCU4 4167 aa9.86□□□□□ -0.83
HERPUD1-210ENST00000565966 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
HERPUD1-210ENST00000565966 TRAV8-1A0A0A6YYK1 113 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 SERTM2A0A1B0GWG4 89 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 FAM74A7A6NL05 159 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 LYRM9A8MSI8 78 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 LY6G6CO95867 125 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 EIF5AL1Q6IS14 154 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 Q6ZQT7 251 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 ZNF493Q6ZR52 646 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
HERPUD1-210ENST00000565966 A0A1B0GV50 99 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 H2AFB1P0C5Y9 115 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 SULT1A2P50226 295 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 RAB5CP51148 216 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 NKX2-5P52952 324 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 DAD1P61803 113 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 RNASE8Q8TDE3 154 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 TVP23CQ96ET8 276 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 SGK494Q96LW2 274 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 PYGO2Q9BRQ0 406 aa9.84□□□□□ -0.83
HERPUD1-210ENST00000565966 RYR2Q92736 4967 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 LGALS9CQ6DKI2 356 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 CCDC28AQ8IWP9 274 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 CYB561D1Q8N8Q1 229 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 ATG101Q9BSB4 218 aa9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 NKX6-2Q9C056 277 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 TIMM8BQ9Y5J9 83 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-210ENST00000565966 K7EQM0 130 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 IFNA7P01567 189 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 IGLV2-11P01706 119 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 Q6AWC8 147 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 PSG8Q9UQ74 426 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 ARL2-SNX15V9GYD0 113 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 HYDINQ4G0P3 5121 aa9.82□□□□□ -0.84
HERPUD1-210ENST00000565966 TRAV1-1A0A0B4J248 108 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 PEX7O00628 323 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 PAGE4O60829 102 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 FLI1Q01543 452 aaPredicted RBP9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 CST9LP1Q5W188 147 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 EIF4E3Q8N5X7 224 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 TREM1Q9NP99 234 aa9.81□□□□□ -0.84
HERPUD1-210ENST00000565966 IGHV1OR15-1A0A075B7D0 117 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 TRAV34A0A0B4J273 112 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 FBLL1A6NHQ2 334 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 CBY3A6NI87 242 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 F6UZH7 168 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 RGS13O14921 159 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 ATP5G3P48201 142 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 CCL20P78556 96 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 HIST1H2BAQ96A08 127 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 FAM210BQ96KR6 192 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 NDFIP1Q9BT67 221 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 NDUFAF3Q9BU61 184 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 TP53TG3Q9ULZ0 132 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
HERPUD1-210ENST00000565966 SNURFLB1AK76 121 aa9.79□□□□□ -0.84
HERPUD1-210ENST00000565966 HTN3P15516 51 aa9.79□□□□□ -0.84
HERPUD1-210ENST00000565966 PPT1P50897 306 aa9.79□□□□□ -0.84
HERPUD1-210ENST00000565966 C11orf72Q8NBR9 251 aa9.79□□□□□ -0.84
HERPUD1-210ENST00000565966 C8orf49Q96NF6 230 aa9.79□□□□□ -0.84
HERPUD1-210ENST00000565966 KMT2AQ03164 3969 aa9.78□□□□□ -0.84
HERPUD1-210ENST00000565966 MUC21Q5SSG8 566 aa9.78□□□□□ -0.84
HERPUD1-210ENST00000565966 ZNF680Q8NEM1 530 aa9.78□□□□□ -0.84
HERPUD1-210ENST00000565966 TCEAL7Q9BRU2 100 aa9.78□□□□□ -0.84
HERPUD1-210ENST00000565966 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
HERPUD1-210ENST00000565966 TRAV21A0A0B4J279 112 aa9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 IBA57Q5T440 356 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 ALKAL2Q6UX46 152 aa9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 Q86TA4 180 aa9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
HERPUD1-210ENST00000565966 TEX46H3BTG2 121 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 ATP5G1P05496 136 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 TCL1AP56279 114 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 FAM159AQ6UWV7 190 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 LINC00612Q8N6U2 182 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 FMC1Q96HJ9 113 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 MANBALQ9NQG1 85 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 VPS13DQ5THJ4 4388 aa9.76□□□□□ -0.85
HERPUD1-210ENST00000565966 MUC4Q99102 2169 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 TRBV6-1A0A0K0K1D8 114 aa9.75□□□□□ -0.85
HERPUD1-210ENST00000565966 SCO2A0A1W2PP80 73 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms