RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 GAGE12BA1L429 117 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 K7EQM0 130 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 GAGE7O76087 117 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 RNF212Q495C1 297 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 GOLT1AQ6ZVE7 132 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 GSN-AS1Q9NRJ2 163 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 VPS13DQ5THJ4 4388 aa13.99□□□□□ -0.17
CMTM3-211ENST00000565922 TCL1AP56279 114 aa13.98□□□□□ -0.17
CMTM3-211ENST00000565922 Q6AWC8 147 aa13.98□□□□□ -0.17
CMTM3-211ENST00000565922 IQCF2Q8IXL9 164 aa13.98□□□□□ -0.17
CMTM3-211ENST00000565922 NDFIP1Q9BT67 221 aa13.98□□□□□ -0.17
CMTM3-211ENST00000565922 HMSDA8MTL9 139 aa13.97□□□□□ -0.17
CMTM3-211ENST00000565922 ZNF415Q09FC8 603 aa13.97□□□□□ -0.17
CMTM3-211ENST00000565922 FAM159AQ6UWV7 190 aa13.96□□□□□ -0.17
CMTM3-211ENST00000565922 KCNRGQ8N5I3 272 aa13.96□□□□□ -0.17
CMTM3-211ENST00000565922 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
CMTM3-211ENST00000565922 NACAE9PAV3 2078 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 TRGV2A0A075B6R0 118 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 TRGV1A0A0A0MS02 117 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 A0A1W2PRE2 83 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 FBLL1A6NHQ2 334 aaKnown RBP13.95□□□□□ -0.18
CMTM3-211ENST00000565922 SMLR1H3BR10 107 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 TCRAP04437 139 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-211ENST00000565922 GNG5P63218 68 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 OR5I1Q13606 314 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 Q6ZTI0 123 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 ATG101Q9BSB4 218 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 TREM1Q9NP99 234 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 CYTL1Q9NRR1 136 aa13.95□□□□□ -0.18
CMTM3-211ENST00000565922 TRGV11A0A075B6L2 103 aa13.94□□□□□ -0.18
CMTM3-211ENST00000565922 A0A0D9SG52 128 aa13.94□□□□□ -0.18
CMTM3-211ENST00000565922 SPINK4O60575 86 aa13.94□□□□□ -0.18
CMTM3-211ENST00000565922 NUDT3O95989 172 aa13.94□□□□□ -0.18
CMTM3-211ENST00000565922 SUMO1P63165 101 aaKnown RBP13.94□□□□□ -0.18
CMTM3-211ENST00000565922 SSX7Q7RTT5 188 aa13.94□□□□□ -0.18
CMTM3-211ENST00000565922 NKX6-2Q9C056 277 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-211ENST00000565922 KLF12Q9Y4X4 402 aa13.94□□□□□ -0.18
CMTM3-211ENST00000565922 TRAV8-1A0A0A6YYK1 113 aa13.93□□□□□ -0.18
CMTM3-211ENST00000565922 TRAV21A0A0B4J279 112 aa13.93□□□□□ -0.18
CMTM3-211ENST00000565922 KANTRA0A1W2PQU2 76 aa13.93□□□□□ -0.18
CMTM3-211ENST00000565922 MUC21Q5SSG8 566 aa13.93□□□□□ -0.18
CMTM3-211ENST00000565922 CYB561D1Q8N8Q1 229 aa13.93□□□□□ -0.18
CMTM3-211ENST00000565922 EPDR1Q9UM22 224 aa13.93□□□□□ -0.18
CMTM3-211ENST00000565922 MUC4Q99102 2169 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 GGTLC3B5MD39 225 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 H3BNG1 76 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 EIF5AP63241 154 aaKnown RBP13.92□□□□□ -0.18
CMTM3-211ENST00000565922 ZNF726P1Q15940 193 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 Q6ZQT7 251 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 STOML3Q8TAV4 291 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 TMPRSS5Q9H3S3 457 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 TP53TG3Q9ULZ0 132 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 DNAH6Q9C0G6 4158 aa13.92□□□□□ -0.18
CMTM3-211ENST00000565922 TRAV26-1A0A087WT03 109 aa13.91□□□□□ -0.18
CMTM3-211ENST00000565922 CCL18P55774 89 aa13.91□□□□□ -0.18
CMTM3-211ENST00000565922 TDRG1Q3Y452 100 aa13.91□□□□□ -0.18
CMTM3-211ENST00000565922 ZFP69Q49AA0 526 aa13.91□□□□□ -0.18
CMTM3-211ENST00000565922 TMEM75Q8N9X5 138 aa13.91□□□□□ -0.18
CMTM3-211ENST00000565922 NAGKQ9UJ70 344 aa13.91□□□□□ -0.18
CMTM3-211ENST00000565922 MAP1LC3B2A6NCE7 125 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 F6UZH7 168 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 BCL2L11O43521 198 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 SEC11BP0C7V7 166 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 HOXA5P20719 270 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 PPT1P50897 306 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 FLI1Q01543 452 aaPredicted RBP13.9□□□□□ -0.18
CMTM3-211ENST00000565922 TMEM183BQ1AE95 376 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 TMEM183AQ8IXX5 376 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 OR11H4Q8NGC9 324 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 KCNS1Q96KK3 526 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 SPXQ9BT56 116 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 ZNF471Q9BX82 626 aaPredicted RBP13.9□□□□□ -0.18
CMTM3-211ENST00000565922 MAP1LC3BQ9GZQ8 125 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 PSG8Q9UQ74 426 aa13.9□□□□□ -0.18
CMTM3-211ENST00000565922 UMAD1C9J7I0 102 aa13.89□□□□□ -0.19
CMTM3-211ENST00000565922 IFNA7P01567 189 aa13.89□□□□□ -0.19
CMTM3-211ENST00000565922 TVP23CQ96ET8 276 aa13.89□□□□□ -0.19
CMTM3-211ENST00000565922 SDF2L1Q9HCN8 221 aa13.89□□□□□ -0.19
CMTM3-211ENST00000565922 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-211ENST00000565922 SAPCD1Q5SSQ6 148 aa13.88□□□□□ -0.19
CMTM3-211ENST00000565922 SGK494Q96LW2 274 aa13.88□□□□□ -0.19
CMTM3-211ENST00000565922 MRPL16Q9NX20 251 aaKnown RBP13.88□□□□□ -0.19
CMTM3-211ENST00000565922 A0A0J9YY99 117 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 PFDN1O60925 122 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 UBE2G2P60604 165 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 SLAQ13239 276 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 SMUG1Q53HV7 270 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 PRNTQ86SH4 94 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 HIST1H2BAQ96A08 127 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
CMTM3-211ENST00000565922 FAM74A7A6NL05 159 aa13.86□□□□□ -0.19
CMTM3-211ENST00000565922 LINC00336Q6ZUF6 198 aa13.86□□□□□ -0.19
CMTM3-211ENST00000565922 TCEAL7Q9BRU2 100 aa13.86□□□□□ -0.19
CMTM3-211ENST00000565922 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms