RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 TRBV19A0A075B6N1 114 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 A0A1W2PPV4 95 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 A8MTW9 85 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 DUSP14O95147 198 aaKnown RBP7.69□□□□□ -1.18
CAPN3-215ENST00000565559 NBEAP1P0C6P0 100 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 PYYP10082 97 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 RAB2AP61019 212 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 HAMPP81172 84 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 PSG9Q00887 426 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 KHDC3LQ587J8 217 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 GDF5OSQ5U4N7 250 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 IGFL4Q6B9Z1 124 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 AKAP14Q86UN6 197 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 RNF182Q8N6D2 247 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 OR10G4Q8NGN3 311 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 OR10G7Q8NGN6 311 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 ARPC5LQ9BPX5 153 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 PAXXQ9BUH6 204 aa7.69□□□□□ -1.18
CAPN3-215ENST00000565559 hCG_2014768A0A024R1R8 64 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 LYRM9A8MSI8 78 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 SLC17A3O00476 420 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 NDUFB4O95168 129 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 IGKV3-20P01619 116 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 C1QBP02746 253 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 ATP5G1P05496 136 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 SNRPCP09234 159 aaKnown RBP7.68□□□□□ -1.18
CAPN3-215ENST00000565559 DEFB130BP0DP73 79 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 DEFB130AP0DP74 79 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 ATP5G3P48201 142 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 FXYD7P58549 80 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 DEFB1P60022 68 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 ZNF738Q8NE65 137 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 NUDT10Q8NFP7 164 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 NUDT11Q96G61 164 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 HYLS1Q96M11 299 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 UPK3BQ9BT76 320 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 SH3BGRL3Q9H299 93 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 PRELID1Q9Y255 219 aa7.68□□□□□ -1.18
CAPN3-215ENST00000565559 KANTRA0A1W2PQU2 76 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 F6UB75 175 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 H3BTX0 84 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 BCL2L11O43521 198 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 OR7C2O60412 319 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 CDC34P49427 236 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-215ENST00000565559 EIF5AP63241 154 aaKnown RBP7.67□□□□□ -1.18
CAPN3-215ENST00000565559 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 FAM122CQ6P4D5 195 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 Q6ZRN7 208 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-215ENST00000565559 TMUB2Q71RG4 321 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 OR8A1Q8NGG7 326 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 RPUSD4Q96CM3 377 aaKnown RBP7.67□□□□□ -1.18
CAPN3-215ENST00000565559 FXYD5Q96DB9 178 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 MRPL53Q96EL3 112 aaKnown RBP7.67□□□□□ -1.18
CAPN3-215ENST00000565559 TMEM208Q9BTX3 173 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 TMEM70Q9BUB7 260 aa7.67□□□□□ -1.18
CAPN3-215ENST00000565559 OXTP01178 125 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 OR10J4P0C629 311 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 SEC11BP0C7V7 166 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 STAG3L2P0CL84 134 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 STAG3L3P0CL85 134 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 CNN1P51911 297 aaKnown RBP7.66□□□□□ -1.18
CAPN3-215ENST00000565559 LGALSLQ3ZCW2 172 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-215ENST00000565559 AMTNQ6UX39 209 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 BLNKQ8WV28 456 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 RAB24Q969Q5 203 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 ACTR3CQ9C0K3 210 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-215ENST00000565559 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
CAPN3-215ENST00000565559 A0A1B0GVG6 124 aa7.65□□□□□ -1.18
CAPN3-215ENST00000565559 PFDN1O60925 122 aa7.65□□□□□ -1.18
CAPN3-215ENST00000565559 UBE2L3P68036 154 aaKnown RBP7.65□□□□□ -1.18
CAPN3-215ENST00000565559 AKR1C8PQ5T2L2 129 aa7.65□□□□□ -1.18
CAPN3-215ENST00000565559 ZNF471Q9BX82 626 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-215ENST00000565559 MRPS16Q9Y3D3 137 aaKnown RBP7.65□□□□□ -1.18
CAPN3-215ENST00000565559 A0A087WTM6 91 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 CTXND1A0A1B0GTU2 59 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 UMAD1C9J7I0 102 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 CXorf1O96002 111 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 HIST1H1AQ02539 215 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-215ENST00000565559 NFE4Q86UQ8 179 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 BAP18Q8IXM2 172 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 C1orf158Q8N1D5 194 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 EXOC3-AS1Q8N2X6 119 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 SUN5Q8TC36 379 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 PHYHIPLQ96FC7 376 aa7.64□□□□□ -1.19
CAPN3-215ENST00000565559 CBY3A6NI87 242 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 PRAC2D3DTV9 90 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 M0R3E3 92 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 DNAH10OSP0CZ25 163 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 ARL14EPLP0DKL9 152 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 TPT1P13693 172 aaKnown RBP7.63□□□□□ -1.19
CAPN3-215ENST00000565559 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
CAPN3-215ENST00000565559 ARL6IP6Q8N6S5 226 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 LINC00477Q96M19 166 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 SLC35B3Q9H1N7 401 aa7.63□□□□□ -1.19
CAPN3-215ENST00000565559 TMEM167BQ9NRX6 74 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms