RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TCEAL7Q9BRU2 100 aa11.49□□□□□ -0.57
RAB40C-208ENST00000564703 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
RAB40C-208ENST00000564703 PEX7O00628 323 aa11.48□□□□□ -0.57
RAB40C-208ENST00000564703 ZNF324O75467 553 aaPredicted RBP11.48□□□□□ -0.57
RAB40C-208ENST00000564703 PRM2P04554 102 aa11.48□□□□□ -0.57
RAB40C-208ENST00000564703 AZU1P20160 251 aa11.48□□□□□ -0.57
RAB40C-208ENST00000564703 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
RAB40C-208ENST00000564703 FLI1Q01543 452 aaPredicted RBP11.48□□□□□ -0.57
RAB40C-208ENST00000564703 PRNTQ86SH4 94 aa11.48□□□□□ -0.57
RAB40C-208ENST00000564703 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
RAB40C-208ENST00000564703 HUWE1Q7Z6Z7 4374 aaKnown RBP11.48□□□□□ -0.57
RAB40C-208ENST00000564703 CBY3A6NI87 242 aa11.47□□□□□ -0.57
RAB40C-208ENST00000564703 IFNA1P01562 189 aa11.47□□□□□ -0.57
RAB40C-208ENST00000564703 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
RAB40C-208ENST00000564703 TMEM75Q8N9X5 138 aa11.47□□□□□ -0.57
RAB40C-208ENST00000564703 TMEM263Q8WUH6 116 aaKnown RBP11.47□□□□□ -0.57
RAB40C-208ENST00000564703 PHLDA1Q8WV24 401 aaPredicted RBP11.47□□□□□ -0.57
RAB40C-208ENST00000564703 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
RAB40C-208ENST00000564703 GNG13Q9P2W3 67 aa11.47□□□□□ -0.57
RAB40C-208ENST00000564703 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
RAB40C-208ENST00000564703 TIMM8BQ9Y5J9 83 aaPredicted RBP11.47□□□□□ -0.57
RAB40C-208ENST00000564703 NUPR2A6NF83 97 aa11.46□□□□□ -0.57
RAB40C-208ENST00000564703 SNURFLB1AK76 121 aa11.46□□□□□ -0.57
RAB40C-208ENST00000564703 C11orf94C9JXX5 98 aa11.46□□□□□ -0.57
RAB40C-208ENST00000564703 UBE2G1P62253 170 aa11.46□□□□□ -0.57
RAB40C-208ENST00000564703 CCL20P78556 96 aa11.46□□□□□ -0.57
RAB40C-208ENST00000564703 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
RAB40C-208ENST00000564703 DKK2Q9UBU2 259 aa11.46□□□□□ -0.57
RAB40C-208ENST00000564703 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 TRAV34A0A0B4J273 112 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 TRAV21A0A0B4J279 112 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 LYRM9A8MSI8 78 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 ATP5G3P48201 142 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 SMUG1Q53HV7 270 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
RAB40C-208ENST00000564703 FAM159AQ6UWV7 190 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 LINC00479Q96M42 142 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 TXNDC17Q9BRA2 123 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 LINC00467Q9BRT7 94 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
RAB40C-208ENST00000564703 IGLV2-11P01706 119 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
RAB40C-208ENST00000564703 AKR1C3P42330 323 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 DAD1P61803 113 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 ANXA2RQ3ZCQ2 193 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 PRR9Q5T870 116 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 Q6AWC8 147 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 ZNF680Q8NEM1 530 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 TVP23CQ96ET8 276 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 FMC1Q96HJ9 113 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 ZFP30Q9Y2G7 519 aa11.44□□□□□ -0.58
RAB40C-208ENST00000564703 TRAV10A0A0B4J240 114 aa11.43□□□□□ -0.58
RAB40C-208ENST00000564703 MUC21Q5SSG8 566 aa11.43□□□□□ -0.58
RAB40C-208ENST00000564703 ZNF767PQ75MW2 155 aa11.43□□□□□ -0.58
RAB40C-208ENST00000564703 RNASE8Q8TDE3 154 aaKnown RBP11.43□□□□□ -0.58
RAB40C-208ENST00000564703 NOP10Q9NPE3 64 aaKnown RBP11.43□□□□□ -0.58
RAB40C-208ENST00000564703 GCGP01275 180 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 TAGLN2P37802 199 aaKnown RBP11.42□□□□□ -0.58
RAB40C-208ENST00000564703 Q6ZTC4 211 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 NAGKQ9UJ70 344 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 KLF12Q9Y4X4 402 aa11.42□□□□□ -0.58
RAB40C-208ENST00000564703 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
RAB40C-208ENST00000564703 TMEM183BQ1AE95 376 aa11.41□□□□□ -0.58
RAB40C-208ENST00000564703 Q6ZQT7 251 aa11.41□□□□□ -0.58
RAB40C-208ENST00000564703 C2CD4CQ8TF44 421 aa11.41□□□□□ -0.58
RAB40C-208ENST00000564703 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
RAB40C-208ENST00000564703 GSN-AS1Q9NRJ2 163 aa11.41□□□□□ -0.58
RAB40C-208ENST00000564703 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
RAB40C-208ENST00000564703 PLAC8L1A1L4L8 177 aa11.4□□□□□ -0.58
RAB40C-208ENST00000564703 FABP5P3A8MUU1 101 aa11.4□□□□□ -0.58
RAB40C-208ENST00000564703 PFN1P07737 140 aaKnown RBP11.4□□□□□ -0.58
RAB40C-208ENST00000564703 VAX2Q9UIW0 290 aa11.4□□□□□ -0.58
RAB40C-208ENST00000564703 TRBV6-1A0A0K0K1D8 114 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 SCO2A0A1W2PP80 73 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 PDE6DO43924 150 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 HTN3P15516 51 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 MEF2BQ02080 365 aaPredicted RBP11.39□□□□□ -0.59
RAB40C-208ENST00000564703 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
RAB40C-208ENST00000564703 IBA57Q5T440 356 aaKnown RBP11.39□□□□□ -0.59
RAB40C-208ENST00000564703 Q86TA4 180 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 TMEM183AQ8IXX5 376 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
RAB40C-208ENST00000564703 IGLL5B9A064 214 aa11.38□□□□□ -0.59
RAB40C-208ENST00000564703 BCL2P10415 239 aa11.38□□□□□ -0.59
RAB40C-208ENST00000564703 ZNF415Q09FC8 603 aa11.38□□□□□ -0.59
RAB40C-208ENST00000564703 TDRG1Q3Y452 100 aa11.38□□□□□ -0.59
RAB40C-208ENST00000564703 BAGE2Q86Y30 109 aa11.38□□□□□ -0.59
RAB40C-208ENST00000564703 GAGE12BA1L429 117 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 GNRH2O43555 120 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 GAGE7O76087 117 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 LTAP01374 205 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
RAB40C-208ENST00000564703 ZNF80P51504 273 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms