RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 PRO1933Q9H354 126 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 EPG5Q9HCE0 2579 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 LOC102724200A0A096LPH7 203 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 IGHV3-35A0A0C4DH35 117 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 A0A0G2JLM5 398 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 H3BUX3 64 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 NDUFA4O00483 81 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 COX6B1P14854 86 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 PMCHP20382 165 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 C8orf49Q96NF6 230 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 DUX5Q96PT3 197 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 Q9H8V8 135 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 ASH1LQ9NR48 2969 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 IGKV2-40A0A087WW87 121 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 KIR2DL5BA0A0G2JN68 375 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 KIR2DL5BA0A0G2JPC4 375 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 FABP5P3A8MUU1 101 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 SH2D1AO60880 128 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 IGKV2D-40P01614 121 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 NIT1Q86X76 327 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 KIR2DL5AQ8N109 375 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 C14orf144Q96I85 54 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 NDUFAF3Q9BU61 184 aa5.56□□□□□ -1.52
HERPUD1-209ENST00000564678 KMT2BQ9UMN6 2715 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 ARMS2P0C7Q2 107 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 LCE2CQ5TA81 110 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 NRGNQ92686 78 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 VGLL1Q99990 258 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 C20orf144Q9BQM9 153 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 CSMD1Q96PZ7 3565 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 USP24Q9UPU5 2620 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 CFAP46Q8IYW2 2715 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 IGHV3OR16-8A0A075B7F1 116 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 A0A096LNT2 108 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 OR5AL1P0C617 328 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 LINC00614P0C842 121 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 KRTDAPP60985 99 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 LOXL1Q08397 574 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 LY6EQ16553 131 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 LINC01620Q4KN68 170 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 Q71RC1 249 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF843Q8N446 348 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 CBY1Q9Y3M2 126 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 LENEPQ9Y5L5 61 aa5.55□□□□□ -1.52
HERPUD1-209ENST00000564678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.55□□□□□ -1.529e-11■■■□□ 17.2
HERPUD1-209ENST00000564678 SPG11Q96JI7 2443 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 ZFYVE26Q68DK2 2539 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 M0R2Z0 102 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 RNASE1P07998 156 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 NTF3P20783 257 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 HLA-DMBP28068 263 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 PMCHL1Q16048 86 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 MRPL23Q16540 153 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 LYZL1Q6UWQ5 148 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 C9orf47Q6ZRZ4 202 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 FAM19A2Q8N3H0 131 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 LINC00527Q9UJ94 153 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 SVEP1Q4LDE5 3571 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
HERPUD1-209ENST00000564678 LCE2BO14633 110 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 IGLC6P0CF74 106 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 CTRLP40313 264 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 BLCAPP62952 87 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 HIST1H1AQ02539 215 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 TMEM78Q5T7P6 136 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 IGFL4Q6B9Z1 124 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 Q8N976 141 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 URB1-AS1Q96HZ7 61 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 BBC3Q96PG8 261 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 VAMP8Q9BV40 100 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 TM2D2Q9BX73 214 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 CNFNQ9BYD5 112 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 TRAV8-2A0A0B4J237 113 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 FAM181BA6NEQ2 426 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 PRB1P04280 392 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF80P51504 273 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF138P52744 262 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 FAM104BQ5XKR9 115 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 MRPL52Q86TS9 123 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 FER1L6-AS1Q8NA97 138 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 AGPAT4-IT1Q9H0P7 198 aa5.53□□□□□ -1.52
HERPUD1-209ENST00000564678 USP9XQ93008 2570 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV3-66A0A0C4DH42 116 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 PRAC2D3DTV9 90 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 K7EMT4 169 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 CRXO43186 299 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 SRSF1Q07955 248 aaKnown RBP eCLIP5.52□□□□□ -1.539e-10■■■■■ 41.4
HERPUD1-209ENST00000564678 ZNF124Q15973 351 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 OR4X2Q8NGF9 303 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 Q8TAT8 98 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 LINC00477Q96M19 166 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 RNF114Q9Y508 228 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 CSDC2Q9Y534 153 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 U3KQK5 164 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms