RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 CENPWQ5EE01 88 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 GBGT1Q8N5D6 347 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 OR2K2Q8NGT1 345 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 C17orf77Q96MU5 243 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 GPR61Q9BZJ8 451 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 SMCO4Q9NRQ5 59 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 SIGLEC8Q9NYZ4 499 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 PSG8Q9UQ74 426 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 ZANQ9Y493 2812 aa6.18□□□□□ -1.42
SMG1-209ENST00000563836 XKRY2A2RUG3 117 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 H7BYZ3 331 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 SLC17A3O00476 420 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 DUSP14O95147 198 aaKnown RBP6.17□□□□□ -1.42
SMG1-209ENST00000563836 ADCYAP1P18509 176 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 INSL3P51460 131 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 RPL23P62829 140 aaKnown RBP6.17□□□□□ -1.42
SMG1-209ENST00000563836 GUCA2BQ16661 112 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 PIK3CD-AS1Q5SR53 167 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 C2CD4CQ8TF44 421 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 LINC00477Q96M19 166 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 SPAG8Q99932 426 aaPredicted RBP6.17□□□□□ -1.42
SMG1-209ENST00000563836 MS4A6AQ9H2W1 248 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 SMAD5-AS1Q9Y6J3 95 aa6.17□□□□□ -1.42
SMG1-209ENST00000563836 FLNBO75369 2602 aaKnown RBP6.16□□□□□ -1.42
SMG1-209ENST00000563836 A0A087WWC5 75 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 C7orf77A4D0Y5 90 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 CXorf65A6NEN9 183 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 ZNF705GA8MUZ8 300 aaPredicted RBP6.16□□□□□ -1.42
SMG1-209ENST00000563836 GATCO43716 136 aaKnown RBP6.16□□□□□ -1.42
SMG1-209ENST00000563836 CSN3P07498 182 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 TSPOP30536 169 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
SMG1-209ENST00000563836 C9orf66Q5T8R8 295 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 DGAT2L7PQ6IED9 249 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 PRR27Q6MZM9 219 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 Q86TA4 180 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 TMEM183AQ8IXX5 376 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 BORCS7Q96B45 105 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 KLF12Q9Y4X4 402 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 LENEPQ9Y5L5 61 aa6.16□□□□□ -1.42
SMG1-209ENST00000563836 F8P00451 2351 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 M0R3E3 92 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 RHODO00212 210 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 P01737 135 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 PCP4P48539 62 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 ZNF138P52744 262 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 HIST1H1AQ02539 215 aaPredicted RBP6.15□□□□□ -1.42
SMG1-209ENST00000563836 DEFB114Q30KQ6 69 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 PSMG4Q5JS54 123 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 PET117Q6UWS5 81 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 OCC1Q8TAD7 63 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 ISOC2Q96AB3 205 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 SFRP2Q96HF1 295 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 ASCL2Q99929 193 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 CITED1Q99966 193 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 DERL1Q9BUN8 251 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 TMEM242Q9NWH2 141 aa6.15□□□□□ -1.42
SMG1-209ENST00000563836 ZNF469Q96JG9 3925 aaPredicted RBP6.15□□□□□ -1.43
SMG1-209ENST00000563836 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 IGKV2-40A0A087WW87 121 aaPredicted RBP6.14□□□□□ -1.43
SMG1-209ENST00000563836 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
SMG1-209ENST00000563836 K7EQG2 157 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 UBE2CO00762 179 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 GCGP01275 180 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 LTAP01374 205 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 IGKV2D-40P01614 121 aaPredicted RBP6.14□□□□□ -1.43
SMG1-209ENST00000563836 ZNF688P0C7X2 276 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 LEPP41159 167 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 RPS20P60866 119 aaKnown RBP6.14□□□□□ -1.43
SMG1-209ENST00000563836 BTN1A1Q13410 526 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 RNF212Q495C1 297 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 FOXI2Q6ZQN5 318 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 GTSCR1Q86UQ5 136 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 OR4B1Q8NGF8 309 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 OR8A1Q8NGG7 326 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 SGK494Q96LW2 274 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 LINC00479Q96M42 142 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 OSTCQ9NRP0 149 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 MTORP42345 2549 aa6.14□□□□□ -1.43
SMG1-209ENST00000563836 TRBV7-9A0A0J9YWB2 115 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 FABP5P3A8MUU1 101 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 A8MWL6 223 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 OR11H12B2RN74 326 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 GPX1P07203 203 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 NUTF2P61970 127 aaKnown RBP6.13□□□□□ -1.43
SMG1-209ENST00000563836 OR5I1Q13606 314 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 FAM162BQ5T6X4 162 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 FAM231DQ6ZW35 169 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 TMEM61Q8N0U2 210 aa6.13□□□□□ -1.43
SMG1-209ENST00000563836 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 882.4 ms