RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PFDN1O60925 122 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 TCRAP04437 139 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 GPX1P07203 203 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 TPT1P13693 172 aaKnown RBP6.06□□□□□ -1.44
UBR1-204ENST00000563239 HTN1P15515 57 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
UBR1-204ENST00000563239 FAM74A1Q5RGS3 127 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 ZNF493Q6ZR52 646 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 C9orf62Q8N4C0 152 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 C5orf17Q8NAS9 161 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 CMTM2Q8TAZ6 248 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 C2CD4CQ8TF44 421 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 TMEM263Q8WUH6 116 aaKnown RBP6.06□□□□□ -1.44
UBR1-204ENST00000563239 C16orf74Q96GX8 76 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 SGK494Q96LW2 274 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 PYGO2Q9BRQ0 406 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 NIPSNAP3BQ9BS92 247 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 APLNQ9ULZ1 77 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 EPDR1Q9UM22 224 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 RPH3ALQ9UNE2 315 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 KLK5Q9Y337 293 aaPredicted RBP6.06□□□□□ -1.44
UBR1-204ENST00000563239 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 DEFB131BA0A096LNP1 70 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 LYRM9A8MSI8 78 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 UMAD1C9J7I0 102 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 LCE2BO14633 110 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 UBE2G2P60604 165 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 Q6AWC8 147 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 CCDC28AQ8IWP9 274 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 IQCF2Q8IXL9 164 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 LINC00612Q8N6U2 182 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 C11orf72Q8NBR9 251 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 FAM213BQ8TBF2 198 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 LINC00479Q96M42 142 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 TP53TG3Q9ULZ0 132 aa6.05□□□□□ -1.44
UBR1-204ENST00000563239 TEX48A0A1B0GUV7 120 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 SERTM2A0A1B0GWG4 89 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 IGLL5B9A064 214 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 EIF5AP63241 154 aaKnown RBP6.04□□□□□ -1.44
UBR1-204ENST00000563239 TNP2Q05952 138 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 ANXA2RQ3ZCQ2 193 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 DPPA3Q6W0C5 159 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 EIF4E3Q8N5X7 224 aaKnown RBP6.04□□□□□ -1.44
UBR1-204ENST00000563239 CYB561D1Q8N8Q1 229 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 SFT2D1Q8WV19 159 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 NOP10Q9NPE3 64 aaKnown RBP6.04□□□□□ -1.44
UBR1-204ENST00000563239 PSG8Q9UQ74 426 aa6.04□□□□□ -1.44
UBR1-204ENST00000563239 TIMM8BQ9Y5J9 83 aaPredicted RBP6.04□□□□□ -1.44
UBR1-204ENST00000563239 IGHV4-4A0A075B6R2 117 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 IGHV1OR15-1A0A075B7D0 117 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 TRAV34A0A0B4J273 112 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 F6UZH7 168 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 DEFB130BP0DP73 79 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 DEFB130AP0DP74 79 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 SULT1A2P50226 295 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
UBR1-204ENST00000563239 DAD1P61803 113 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 CCL20P78556 96 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 DAZ2Q13117 558 aaKnown RBP6.03□□□□□ -1.44
UBR1-204ENST00000563239 SLC51BQ86UW2 128 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 C8orf49Q96NF6 230 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 ATG101Q9BSB4 218 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 TREM1Q9NP99 234 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 KLF12Q9Y4X4 402 aa6.03□□□□□ -1.44
UBR1-204ENST00000563239 KMT2AQ03164 3969 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 DNAH6Q9C0G6 4158 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 TRAV1-1A0A0B4J248 108 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 A0A1B0GV50 99 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 CBY3A6NI87 242 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 PEX7O00628 323 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 RGS13O14921 159 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 EREGO14944 169 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 PAGE4O60829 102 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 ATP5G3P48201 142 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 NKX2-5P52952 324 aaPredicted RBP6.02□□□□□ -1.45
UBR1-204ENST00000563239 TCL1AP56279 114 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 FLI1Q01543 452 aaPredicted RBP6.02□□□□□ -1.45
UBR1-204ENST00000563239 TDRG1Q3Y452 100 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 ZFP69Q49AA0 526 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 MUC21Q5SSG8 566 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 Q6ZTI0 123 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 PRNTQ86SH4 94 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 NKX6-2Q9C056 277 aaPredicted RBP6.02□□□□□ -1.45
UBR1-204ENST00000563239 MDFICQ9P1T7 246 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 C11orf21Q9P2W6 132 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
UBR1-204ENST00000563239 SNURFLB1AK76 121 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 SPINK4O60575 86 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 IFNA7P01567 189 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 HTN3P15516 51 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 RAB5CP51148 216 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 TCTAP57738 103 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 IBA57Q5T440 356 aaKnown RBP6.01□□□□□ -1.45
UBR1-204ENST00000563239 LGALS9CQ6DKI2 356 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 ZNF680Q8NEM1 530 aa6.01□□□□□ -1.45
UBR1-204ENST00000563239 HIST1H2BAQ96A08 127 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms