RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MYOZ3Q8TDC0 251 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 IGHV3-66A0A0C4DH42 116 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 K7ERU9 68 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 GAS8-AS1O95177 125 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 PPIFP30405 207 aaKnown RBP10.03□□□□□ -0.8
USB1-207ENST00000563149 LAGE3Q14657 143 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 MRAP2Q96G30 205 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 ZZEF1O43149 2961 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 SMIM17P0DL12 118 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 C19orf54Q5BKX5 351 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 WFDC3Q8IUB2 231 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 NRACQ8N912 160 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 GLMPQ8WWB7 406 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 LINC00477Q96M19 166 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 FOXC2Q99958 501 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.81
USB1-207ENST00000563149 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 K7EP34 96 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 TRGV3P03979 118 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
USB1-207ENST00000563149 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
USB1-207ENST00000563149 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 UBTD1Q9HAC8 227 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 RAXQ9Y2V3 346 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 LINC01548A6NM66 108 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 H3BUT2 72 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 BRI3O95415 125 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 SMIM13P0DJ93 91 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
USB1-207ENST00000563149 ITLN2Q8WWU7 325 aaPredicted RBP10.01□□□□□ -0.81
USB1-207ENST00000563149 MAP1BP46821 2468 aaKnown RBP10□□□□□ -0.81
USB1-207ENST00000563149 K7EMI3 77 aa10□□□□□ -0.81
USB1-207ENST00000563149 OVOL1O14753 267 aa10□□□□□ -0.81
USB1-207ENST00000563149 BPESC1Q9GZL8 116 aa10□□□□□ -0.81
USB1-207ENST00000563149 IGHV3OR16-13A0A075B7E8 117 aa9.99□□□□□ -0.81
USB1-207ENST00000563149 A0A087WX48 190 aa9.99□□□□□ -0.81
USB1-207ENST00000563149 IGHV3-74A0A0B4J1X5 117 aa9.99□□□□□ -0.81
USB1-207ENST00000563149 NDUFA4O00483 81 aa9.99□□□□□ -0.81
USB1-207ENST00000563149 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
USB1-207ENST00000563149 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
USB1-207ENST00000563149 IGKV2D-26A0A0A0MRZ7 120 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 TRAV12-1A0A0B4J245 112 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 TMEM8BA6NDV4 472 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 H3BUA1 57 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 ZNF207O43670 478 aaKnown RBP9.98□□□□□ -0.81
USB1-207ENST00000563149 ARL3P36405 182 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 TAL2Q16559 108 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 JMJD8Q96S16 334 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 CHAC1Q9BUX1 264 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 UFC1Q9Y3C8 167 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 ANKHD1Q8IWZ3 2542 aaKnown RBP9.98□□□□□ -0.81
USB1-207ENST00000563149 ADGRG4Q8IZF6 3080 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 IGHV3-49A0A0A0MS15 119 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 SLC25A16P16260 332 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 TCTAP57738 103 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 C20orf78Q9BR46 151 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 MEGF9Q9H1U4 602 aa9.98□□□□□ -0.81
USB1-207ENST00000563149 LAMA5O15230 3695 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 TRBV7-9A0A0J9YWB2 115 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 IGF1P05019 195 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 PLNP26678 52 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 C21orf62-AS1Q17RA5 79 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 GTSCR1Q86UQ5 136 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 OR10J6PQ8NGY7 276 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 USMG5Q96IX5 58 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 SMIM2Q9BVW6 85 aa9.97□□□□□ -0.81
USB1-207ENST00000563149 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 IGHV1-69DA0A0B4J2H0 117 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.96□□□□□ -0.81
USB1-207ENST00000563149 H3BVH4 76 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 IGHV1-69P01742 117 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 FABP2P12104 132 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 TMEM160Q9NX00 188 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.81
USB1-207ENST00000563149 DMXL2Q8TDJ6 3036 aa9.96□□□□□ -0.81
USB1-207ENST00000563149 ATMQ13315 3056 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 KALRNO60229 2985 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.82
USB1-207ENST00000563149 M0R381 172 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 SOCS3O14543 225 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 GCSHP23434 173 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 SAMD5Q5TGI4 173 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 CEND1Q8N111 149 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 RAB37Q96AX2 223 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 C20orf173Q96LM9 149 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.82
USB1-207ENST00000563149 SPCS1Q9Y6A9 102 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms