RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 EIF4E3Q8N5X7 224 aaKnown RBP13.2□□□□□ -0.3
CDH11-206ENST00000562998 TMPRSS5Q9H3S3 457 aa13.2□□□□□ -0.3
CDH11-206ENST00000562998 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
CDH11-206ENST00000562998 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
CDH11-206ENST00000562998 KANTRA0A1W2PQU2 76 aa13.19□□□□□ -0.3
CDH11-206ENST00000562998 TCRAP04437 139 aa13.19□□□□□ -0.3
CDH11-206ENST00000562998 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
CDH11-206ENST00000562998 LGALSLQ3ZCW2 172 aaPredicted RBP13.19□□□□□ -0.3
CDH11-206ENST00000562998 ZNF471Q9BX82 626 aaPredicted RBP13.19□□□□□ -0.3
CDH11-206ENST00000562998 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
CDH11-206ENST00000562998 CBY3A6NI87 242 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 IGLV2-11P01706 119 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 DEFB130BP0DP73 79 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 DEFB130AP0DP74 79 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 FHITP49789 147 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 RPH3ALQ9UNE2 315 aa13.18□□□□□ -0.3
CDH11-206ENST00000562998 IGHV1OR15-1A0A075B7D0 117 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 UMAD1C9J7I0 102 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 C1QBP02746 253 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 FGF8P55075 233 aaPredicted RBP13.17□□□□□ -0.3
CDH11-206ENST00000562998 IBA57Q5T440 356 aaKnown RBP13.17□□□□□ -0.3
CDH11-206ENST00000562998 ZNF680Q8NEM1 530 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
CDH11-206ENST00000562998 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
CDH11-206ENST00000562998 GSN-AS1Q9NRJ2 163 aa13.16□□□□□ -0.3
CDH11-206ENST00000562998 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
CDH11-206ENST00000562998 DNAH6Q9C0G6 4158 aa13.16□□□□□ -0.3
CDH11-206ENST00000562998 FAM74A7A6NL05 159 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 SNURFLB1AK76 121 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 RGS13O14921 159 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 TCL1AP56279 114 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 EIF5AP63241 154 aaKnown RBP13.15□□□□□ -0.3
CDH11-206ENST00000562998 TDRG1Q3Y452 100 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 C18orf15Q96N68 181 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 ATG101Q9BSB4 218 aa13.15□□□□□ -0.3
CDH11-206ENST00000562998 ATP5G1P05496 136 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 TPT1P13693 172 aaKnown RBP13.14□□□□□ -0.31
CDH11-206ENST00000562998 HTN3P15516 51 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 ATP5G3P48201 142 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 DPPA3Q6W0C5 159 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 SGK494Q96LW2 274 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
CDH11-206ENST00000562998 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 KLF12Q9Y4X4 402 aa13.14□□□□□ -0.31
CDH11-206ENST00000562998 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
CDH11-206ENST00000562998 SPINK4O60575 86 aa13.13□□□□□ -0.31
CDH11-206ENST00000562998 PFDN1O60925 122 aa13.13□□□□□ -0.31
CDH11-206ENST00000562998 TMEM88Q6PEY1 159 aa13.13□□□□□ -0.31
CDH11-206ENST00000562998 Q6ZTI0 123 aa13.13□□□□□ -0.31
CDH11-206ENST00000562998 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
CDH11-206ENST00000562998 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
CDH11-206ENST00000562998 GAGE12BA1L429 117 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 K7EQM0 130 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 GAGE7O76087 117 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 GAGE12FP0CL80 117 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 GAGE12GP0CL81 117 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 GAGE12IP0CL82 117 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 UBE2G2P60604 165 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 FLI1Q01543 452 aaPredicted RBP13.12□□□□□ -0.31
CDH11-206ENST00000562998 AKAP14Q86UN6 197 aa13.12□□□□□ -0.31
CDH11-206ENST00000562998 hCG_2014768A0A024R1R8 64 aa13.11□□□□□ -0.31
CDH11-206ENST00000562998 F6UZH7 168 aa13.11□□□□□ -0.31
CDH11-206ENST00000562998 MUC21Q5SSG8 566 aa13.11□□□□□ -0.31
CDH11-206ENST00000562998 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
CDH11-206ENST00000562998 LINC00479Q96M42 142 aa13.11□□□□□ -0.31
CDH11-206ENST00000562998 C8orf49Q96NF6 230 aa13.11□□□□□ -0.31
CDH11-206ENST00000562998 TRAV21A0A0B4J279 112 aa13.1□□□□□ -0.31
CDH11-206ENST00000562998 F5H768 121 aa13.1□□□□□ -0.31
CDH11-206ENST00000562998 ZNF80P51504 273 aaPredicted RBP13.1□□□□□ -0.31
CDH11-206ENST00000562998 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
CDH11-206ENST00000562998 SFT2D1Q8WV19 159 aa13.1□□□□□ -0.31
CDH11-206ENST00000562998 HIST1H2BAQ96A08 127 aa13.1□□□□□ -0.31
CDH11-206ENST00000562998 MDFICQ9P1T7 246 aa13.1□□□□□ -0.31
CDH11-206ENST00000562998 PEX7O00628 323 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 P0DMU3 169 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 HOXA5P20719 270 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 FAM159AQ6UWV7 190 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 C15orf53Q8NAA6 179 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 NDFIP1Q9BT67 221 aa13.09□□□□□ -0.31
CDH11-206ENST00000562998 A0A1B0GVG6 124 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 IFNA7P01567 189 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 SAPCD1Q5SSQ6 148 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 PRNTQ86SH4 94 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 C11orf21Q9P2W6 132 aa13.08□□□□□ -0.32
CDH11-206ENST00000562998 TRGV11A0A075B6L2 103 aa13.07□□□□□ -0.32
CDH11-206ENST00000562998 TRGV1A0A0A0MS02 117 aa13.07□□□□□ -0.32
CDH11-206ENST00000562998 TRAV1-1A0A0B4J248 108 aa13.07□□□□□ -0.32
CDH11-206ENST00000562998 TRAV34A0A0B4J273 112 aa13.07□□□□□ -0.32
CDH11-206ENST00000562998 H2AFB1P0C5Y9 115 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms