RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
TCF4-216ENST00000562680 TRAV2A0A0B4J234 112 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 P0C879 139 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 Q6ZWC4 215 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 TCF23Q7RTU1 214 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 FAM19A2Q8N3H0 131 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 OCC1Q8TAD7 63 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 G3V318 75 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 H3BRN7 92 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 IGLV2-14P01704 120 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 MLANAQ16655 118 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 ZNF329Q86UD4 541 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 MAPK1IP1LQ8NDC0 245 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 TSKUQ8WUA8 353 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 A0A1W2PRX2 142 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 LINC01619G3V211 115 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 FOXE3Q13461 319 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 STHQ8IWL8 128 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 IGHV7-81A0A0B4J1V7 117 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 F8WDY8 70 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 OVOL3O00110 214 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 TAX1BP3O14907 124 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 RPL15P61313 204 aaKnown RBP5.97□□□□□ -1.45
TCF4-216ENST00000562680 FOXL1Q12952 345 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 Q8N9W7 124 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 DLX4Q92988 240 aaPredicted RBP5.97□□□□□ -1.45
TCF4-216ENST00000562680 DNAJC30Q96LL9 226 aa5.97□□□□□ -1.45
TCF4-216ENST00000562680 M0R3E3 92 aa5.96□□□□□ -1.45
TCF4-216ENST00000562680 PAPPA-AS1Q5QFB9 102 aa5.96□□□□□ -1.45
TCF4-216ENST00000562680 C9JQL5 133 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 ZNF688P0C7X2 276 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 PRADC1Q9BSG0 188 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 IGLV11-55A0A075B6I3 123 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 FAM181BA6NEQ2 426 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 DPM2O94777 84 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 IGLV2-23P01705 113 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 FAM120AOSQ5T036 256 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 LCNL1Q6ZST4 164 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
TCF4-216ENST00000562680 COX6CP09669 75 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 KIAA1644Q3SXP7 199 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 C11orf52Q96A22 123 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 HOXA3O43365 443 aaPredicted RBP5.96□□□□□ -1.46
TCF4-216ENST00000562680 IGHV4-38-2P0DP08 117 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 CD33P20138 364 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 GTSCR1Q86UQ5 136 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 ZNF492Q9P255 531 aa5.96□□□□□ -1.46
TCF4-216ENST00000562680 TRBV19A0A075B6N1 114 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 IGHV4-59P01825 116 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 LCN12Q6JVE5 192 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 C5orf56Q8N8D9 126 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 GLMPQ8WWB7 406 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 GNB1LQ9BYB4 327 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 HIGD1CA8MV81 97 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 EBI3Q14213 229 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 Q6ZPA2 131 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 TMEM213A2RRL7 107 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 LINC01549A6NIU2 74 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 Q0VG73 95 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 TMEM75Q8N9X5 138 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 MRPL53Q96EL3 112 aaKnown RBP5.95□□□□□ -1.46
TCF4-216ENST00000562680 VGLL1Q99990 258 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 MCRIP2Q9BUT9 160 aaKnown RBP5.95□□□□□ -1.46
TCF4-216ENST00000562680 IGHG2P01859 326 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 EIF4EBP1Q13541 118 aaPredicted RBP5.95□□□□□ -1.46
TCF4-216ENST00000562680 CT83Q5H943 113 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 FAM90A2PQ658T7 463 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 KIR2DL4Q99706 377 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 HIVEP2P31629 2446 aa5.95□□□□□ -1.46
TCF4-216ENST00000562680 LGALS1P09382 135 aaKnown RBP5.94□□□□□ -1.46
TCF4-216ENST00000562680 OXLD1Q5BKU9 147 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 ZNF491Q8N8L2 437 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 I3L2K1 104 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 NSUN5P1Q3KNT7 163 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 EXOC3-AS1Q8N2X6 119 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 WDR87Q6ZQQ6 2873 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 TRAV8-6A0A0B4J262 113 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 TDRG1Q3Y452 100 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 Q86TA4 180 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 LINC01587Q99440 93 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 KIAA1549Q9HCM3 1950 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 A6NDX4 124 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 IGKV3-20P01619 116 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 RNASE4P34096 147 aaKnown RBP5.94□□□□□ -1.46
TCF4-216ENST00000562680 SYNJ2BPP57105 145 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 ORMDL3Q8N138 153 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 C11orf1Q9H5F2 150 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 CSPG4Q6UVK1 2322 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 K7EIM0 57 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 PROP1O75360 226 aa5.94□□□□□ -1.46
TCF4-216ENST00000562680 TRBV20OR9-2A0A075B6H5 130 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 NRGNQ92686 78 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 AJUBAQ96IF1 538 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 PRELID3AQ96N28 172 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 SPATA25Q9BR10 227 aa5.93□□□□□ -1.46
TCF4-216ENST00000562680 GFRA4Q9GZZ7 299 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms