RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SULT1A2P50226 295 aa11.94□□□□□ -0.5
CLK3-207ENST00000562389 Q6ZTC4 211 aa11.94□□□□□ -0.5
CLK3-207ENST00000562389 CCDC28AQ8IWP9 274 aa11.94□□□□□ -0.5
CLK3-207ENST00000562389 CYB561D1Q8N8Q1 229 aa11.94□□□□□ -0.5
CLK3-207ENST00000562389 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
CLK3-207ENST00000562389 FBLL1A6NHQ2 334 aaKnown RBP11.93□□□□□ -0.5
CLK3-207ENST00000562389 LYRM9A8MSI8 78 aa11.93□□□□□ -0.5
CLK3-207ENST00000562389 Q6AWC8 147 aa11.93□□□□□ -0.5
CLK3-207ENST00000562389 TMEM75Q8N9X5 138 aa11.93□□□□□ -0.5
CLK3-207ENST00000562389 TRAV10A0A0B4J240 114 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 IFNA7P01567 189 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 IGLV2-11P01706 119 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 ZNF767PQ75MW2 155 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 HIST1H2BAQ96A08 127 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 NDFIP1Q9BT67 221 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
CLK3-207ENST00000562389 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 PEX7O00628 323 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 PPT1P50897 306 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 NKX2-5P52952 324 aaPredicted RBP11.91□□□□□ -0.5
CLK3-207ENST00000562389 FLI1Q01543 452 aaPredicted RBP11.91□□□□□ -0.5
CLK3-207ENST00000562389 ANXA2RQ3ZCQ2 193 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 EIF4E3Q8N5X7 224 aaKnown RBP11.91□□□□□ -0.5
CLK3-207ENST00000562389 ZNF680Q8NEM1 530 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 TREM1Q9NP99 234 aa11.91□□□□□ -0.5
CLK3-207ENST00000562389 TIMM8BQ9Y5J9 83 aaPredicted RBP11.91□□□□□ -0.5
CLK3-207ENST00000562389 IGHV1OR15-1A0A075B7D0 117 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 A0A1B0GV50 99 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 RGS13O14921 159 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 PAGE4O60829 102 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 DAD1P61803 113 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 Q6ZQT7 251 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 C2CD4CQ8TF44 421 aa11.9□□□□□ -0.5
CLK3-207ENST00000562389 CBY3A6NI87 242 aa11.89□□□□□ -0.51
CLK3-207ENST00000562389 F6UZH7 168 aa11.89□□□□□ -0.51
CLK3-207ENST00000562389 ATP5G3P48201 142 aa11.89□□□□□ -0.51
CLK3-207ENST00000562389 CST9LP1Q5W188 147 aa11.89□□□□□ -0.51
CLK3-207ENST00000562389 C11orf72Q8NBR9 251 aa11.89□□□□□ -0.51
CLK3-207ENST00000562389 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
CLK3-207ENST00000562389 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
CLK3-207ENST00000562389 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
CLK3-207ENST00000562389 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
CLK3-207ENST00000562389 IBA57Q5T440 356 aaKnown RBP11.88□□□□□ -0.51
CLK3-207ENST00000562389 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
CLK3-207ENST00000562389 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
CLK3-207ENST00000562389 TRAV34A0A0B4J273 112 aa11.87□□□□□ -0.51
CLK3-207ENST00000562389 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
CLK3-207ENST00000562389 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
CLK3-207ENST00000562389 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
CLK3-207ENST00000562389 C8orf49Q96NF6 230 aa11.87□□□□□ -0.51
CLK3-207ENST00000562389 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
CLK3-207ENST00000562389 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
CLK3-207ENST00000562389 TCL1AP56279 114 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 TCTAP57738 103 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 CCL20P78556 96 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 Q86TA4 180 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 LINC00612Q8N6U2 182 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 FMC1Q96HJ9 113 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 TP53TG3Q9ULZ0 132 aa11.86□□□□□ -0.51
CLK3-207ENST00000562389 LCE6AA0A183 80 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 DEFB130BP0DP73 79 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 DEFB130AP0DP74 79 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 SMUG1Q53HV7 270 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 GSN-AS1Q9NRJ2 163 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 KLF12Q9Y4X4 402 aa11.85□□□□□ -0.51
CLK3-207ENST00000562389 KMT2CQ8NEZ4 4911 aaKnown RBP11.85□□□□□ -0.51
CLK3-207ENST00000562389 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 IGLL5B9A064 214 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 GCGP01275 180 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 PFN1P07737 140 aaKnown RBP11.84□□□□□ -0.51
CLK3-207ENST00000562389 AKR1C3P42330 323 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 ZNF80P51504 273 aaPredicted RBP11.84□□□□□ -0.51
CLK3-207ENST00000562389 UBE2G1P62253 170 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 ZNF415Q09FC8 603 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 TMEM183BQ1AE95 376 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 GNG13Q9P2W3 67 aa11.84□□□□□ -0.51
CLK3-207ENST00000562389 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 IGHV4-4A0A075B6R2 117 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 COX8CQ7Z4L0 72 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 APLNQ9ULZ1 77 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
CLK3-207ENST00000562389 SPINK4O60575 86 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 IFNA1P01562 189 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 HTN3P15516 51 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 TMEM183AQ8IXX5 376 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 KCNS1Q96KK3 526 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 FAM210BQ96KR6 192 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 LYSTQ99698 3801 aa11.82□□□□□ -0.52
CLK3-207ENST00000562389 GAGE12BA1L429 117 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms