RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DEFB4AO15263 64 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 PAGE4O60829 102 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 AZU1P20160 251 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 ATP5G3P48201 142 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 TDRG1Q3Y452 100 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 ALKAL2Q6UX46 152 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 IQCF2Q8IXL9 164 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 C16orf74Q96GX8 76 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 TXNDC17Q9BRA2 123 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 TP53TG3Q9ULZ0 132 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 PSG8Q9UQ74 426 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
CDH1-204ENST00000562118 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
CDH1-204ENST00000562118 K7EQM0 130 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 PRM2P04554 102 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 GPX1P07203 203 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 FLI1Q01543 452 aaPredicted RBP9.58□□□□□ -0.88
CDH1-204ENST00000562118 Q6ZQT7 251 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 Q86TA4 180 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 C11orf45Q8TAV5 145 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 LINC01587Q99440 93 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 TMEM208Q9BTX3 173 aa9.58□□□□□ -0.88
CDH1-204ENST00000562118 LYRM9A8MSI8 78 aa9.57□□□□□ -0.88
CDH1-204ENST00000562118 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
CDH1-204ENST00000562118 C12orf74Q32Q52 190 aa9.57□□□□□ -0.88
CDH1-204ENST00000562118 FMC1Q96HJ9 113 aa9.57□□□□□ -0.88
CDH1-204ENST00000562118 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
CDH1-204ENST00000562118 RPH3ALQ9UNE2 315 aa9.57□□□□□ -0.88
CDH1-204ENST00000562118 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
CDH1-204ENST00000562118 LTAP01374 205 aa9.56□□□□□ -0.88
CDH1-204ENST00000562118 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
CDH1-204ENST00000562118 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
CDH1-204ENST00000562118 TMEM183BQ1AE95 376 aa9.56□□□□□ -0.88
CDH1-204ENST00000562118 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
CDH1-204ENST00000562118 IBA57Q5T440 356 aaKnown RBP9.56□□□□□ -0.88
CDH1-204ENST00000562118 EIF4E3Q8N5X7 224 aaKnown RBP9.56□□□□□ -0.88
CDH1-204ENST00000562118 ZNF680Q8NEM1 530 aa9.56□□□□□ -0.88
CDH1-204ENST00000562118 TREM1Q9NP99 234 aa9.56□□□□□ -0.88
CDH1-204ENST00000562118 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 A0A1B0GV50 99 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 C11orf94C9JXX5 98 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 F6UZH7 168 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 J3KRW8 73 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 NDUFS6O75380 124 aaKnown RBP9.55□□□□□ -0.88
CDH1-204ENST00000562118 IFNA7P01567 189 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 SPART-AS1P0CW21 52 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 BCL2P10415 239 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 TAGLN2P37802 199 aaKnown RBP9.55□□□□□ -0.88
CDH1-204ENST00000562118 ZNF80P51504 273 aaPredicted RBP9.55□□□□□ -0.88
CDH1-204ENST00000562118 BLOC1S1P78537 153 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 FAM222AQ5U5X8 452 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 CST9LP1Q5W188 147 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 TEX261Q6UWH6 196 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 C8orf49Q96NF6 230 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 MLST8Q9BVC4 326 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 ZFP30Q9Y2G7 519 aa9.55□□□□□ -0.88
CDH1-204ENST00000562118 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 SCO2A0A1W2PP80 73 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 CXorf65A6NEN9 183 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 NUPR2A6NF83 97 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 S100A9P06702 114 aaKnown RBP9.54□□□□□ -0.88
CDH1-204ENST00000562118 PFN1P07737 140 aaKnown RBP9.54□□□□□ -0.88
CDH1-204ENST00000562118 TCL1AP56279 114 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 MEF2BQ02080 365 aaPredicted RBP9.54□□□□□ -0.88
CDH1-204ENST00000562118 CEMP1Q6PRD7 247 aaPredicted RBP9.54□□□□□ -0.88
CDH1-204ENST00000562118 Q6ZTC4 211 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 SGK494Q96LW2 274 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 C18orf15Q96N68 181 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 NDFIP1Q9BT67 221 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 GNG13Q9P2W3 67 aa9.54□□□□□ -0.88
CDH1-204ENST00000562118 TIMM8BQ9Y5J9 83 aaPredicted RBP9.54□□□□□ -0.88
CDH1-204ENST00000562118 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
CDH1-204ENST00000562118 PRNTQ86SH4 94 aa9.53□□□□□ -0.88
CDH1-204ENST00000562118 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
CDH1-204ENST00000562118 C11orf21Q9P2W6 132 aa9.53□□□□□ -0.88
CDH1-204ENST00000562118 PDE6DO43924 150 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 GCGP01275 180 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 IFNA1P01562 189 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 AKR1C3P42330 323 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 ZNF575Q86XF7 245 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 TMEM183AQ8IXX5 376 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 RYR2Q92736 4967 aa9.52□□□□□ -0.89
CDH1-204ENST00000562118 RYR3Q15413 4870 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 RGS13O14921 159 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 SPINK4O60575 86 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 CRIP1P50238 77 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 ZNF674Q2M3X9 581 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 ZFAND6Q6FIF0 208 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 ZC2HC1AQ96GY0 325 aa9.51□□□□□ -0.89
CDH1-204ENST00000562118 DNAH6Q9C0G6 4158 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms