RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 IDNKQ5T6J7 187 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 C10orf25Q5T742 122 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 EIF5AL1Q6IS14 154 aaKnown RBP3.46□□□□□ -1.86
HERC1-213ENST00000561359 WDR73Q6P4I2 378 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 TMEM91Q6ZNR0 172 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 ZNF818PQ6ZRF7 136 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 Q6ZTI0 123 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 NEGR1Q7Z3B1 354 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 ZNF485Q8NCK3 441 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 OR1S2Q8NGQ3 325 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 RNASEH2CQ8TDP1 164 aaKnown RBP3.46□□□□□ -1.86
HERC1-213ENST00000561359 PARD6GQ9BYG4 376 aaPredicted RBP3.46□□□□□ -1.86
HERC1-213ENST00000561359 ACTR3CQ9C0K3 210 aaPredicted RBP3.46□□□□□ -1.86
HERC1-213ENST00000561359 ARL6Q9H0F7 186 aa3.46□□□□□ -1.86
HERC1-213ENST00000561359 GPN1Q9HCN4 374 aaPredicted RBP3.46□□□□□ -1.86
HERC1-213ENST00000561359 AK6Q9Y3D8 172 aaKnown RBP3.46□□□□□ -1.86
HERC1-213ENST00000561359 TRDV1A0A1B0GX56 115 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 IRGMA1A4Y4 181 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 RNF222A6NCQ9 220 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 J3KRW8 73 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 ZNF324O75467 553 aaPredicted RBP3.45□□□□□ -1.86
HERC1-213ENST00000561359 PPYP01298 95 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 RLN1P04808 185 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 IGLC1P0CG04 106 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 RND2P52198 227 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 OR10A3P58181 314 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 YPEL3P61236 119 aaPredicted RBP3.45□□□□□ -1.86
HERC1-213ENST00000561359 HSPE1P61604 102 aaKnown RBP3.45□□□□□ -1.86
HERC1-213ENST00000561359 SELENOTP62341 195 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 RHOBP62745 196 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 ZNF415Q09FC8 603 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 OR2F1Q13607 317 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 JOSD1Q15040 202 aaPredicted RBP3.45□□□□□ -1.86
HERC1-213ENST00000561359 SCGB2B2Q4G0G5 96 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 SAMD13Q5VXD3 122 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 OR8G2PQ6IF36 304 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 H2BFWTQ7Z2G1 175 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 HIST3H2BBQ8N257 126 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 KCNRGQ8N5I3 272 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 SLC35G3Q8N808 338 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 OR51G1Q8NGK1 321 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 OR13C8Q8NGS7 320 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 OR52E5Q8NH55 327 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 NUDCD2Q8WVJ2 157 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 GFI1Q99684 422 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 PAXXQ9BUH6 204 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 PBDC1Q9BVG4 233 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 TM2D2Q9BX73 214 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 SNHG12Q9BXW3 62 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 C20orf85Q9H1P6 137 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 ANXA10Q9UJ72 324 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 RPH3ALQ9UNE2 315 aa3.45□□□□□ -1.86
HERC1-213ENST00000561359 TMEM235A6NFC5 223 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 IBA57-AS1B1ANH7 110 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 C9JCJ5 164 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 H7BYZ3 331 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 BCL2L11O43521 198 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 GCGP01275 180 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 UCHL1P09936 223 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 NBEAP1P0C6P0 100 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 RNASE2P10153 161 aaKnown RBP3.44□□□□□ -1.86
HERC1-213ENST00000561359 SLC25A4P12235 298 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 PTHLHP12272 177 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 TBPP20226 339 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 SRIP30626 198 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 FHITP49789 147 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 AP3S2P59780 193 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 MXD1Q05195 221 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 ARL6IP1Q15041 203 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 RHEBQ15382 184 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 C22orf42Q6IC83 251 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 ETFRF1Q6IPR1 90 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 OR8I2Q8N0Y5 310 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 OR10D4PQ8NGN7 298 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 SAT2Q96F10 170 aaPredicted RBP3.44□□□□□ -1.86
HERC1-213ENST00000561359 LINC01600Q96MT4 127 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 YPEL4Q96NS1 127 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 PRRT1Q99946 306 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 PRO1933Q9H354 126 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 COMMD3Q9UBI1 195 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 ZFP30Q9Y2G7 519 aa3.44□□□□□ -1.86
HERC1-213ENST00000561359 TRGV1A0A0A0MS02 117 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 IGHV3-38A0A0C4DH36 116 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 KANTRA0A1W2PQU2 76 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 XKRY2A2RUG3 117 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 E5RGE8 158 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 PPP1R2P9O14990 202 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 PGLYRP1O75594 196 aaPredicted RBP3.43□□□□□ -1.86
HERC1-213ENST00000561359 TOMM40O96008 361 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 IGHV3-53P01767 116 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 PMP2P02689 132 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 SNRPCP09234 159 aaKnown RBP3.43□□□□□ -1.86
HERC1-213ENST00000561359 OR5AC1P0C628 307 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 PSG1P11464 419 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 HERV-K104P61576 105 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 SUPT4H1P63272 117 aaKnown RBP3.43□□□□□ -1.86
HERC1-213ENST00000561359 HIST1H1AQ02539 215 aaPredicted RBP3.43□□□□□ -1.86
HERC1-213ENST00000561359 PSG3Q16557 428 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms