RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 LINC00477Q96M19 166 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ODF3Q96PU9 254 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ASCL2Q99929 193 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 C16orf95Q9H693 158 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF702PQ9H963 129 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 PSG8Q9UQ74 426 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 WNK2Q9Y3S1 2297 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 CHD6Q8TD26 2715 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ARHGAP32A7KAX9 2087 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 A0A1B0GUS0 222 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 F2Z2F3 143 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 CHEK1O14757 476 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BKO60814 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 NDUFA7O95182 113 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 TRGC2P03986 189 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BJP06899 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 SMIM6P0DI80 62 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 ESDP10768 282 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BOP23527 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BBP33778 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 ID1P41134 155 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BDP58876 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BCP62807 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H1AQ02539 215 aaPredicted RBP4.3□□□□□ -1.72
HMG20A-212ENST00000560986 Q0VG73 95 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 OR5I1Q13606 314 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST2H2BEQ16778 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 SMUG1Q53HV7 270 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.3□□□□□ -1.72
HMG20A-212ENST00000560986 LEMD1Q68G75 181 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 LCN12Q6JVE5 192 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 GOLT1AQ6ZVE7 132 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 WFDC11Q8NEX6 87 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 C4orf3Q8WVX3 66 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BHQ93079 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 BORCS7Q96B45 105 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 MS4A10Q96PG2 267 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BNQ99877 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 HIST1H2BMQ99879 126 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 GNB4Q9HAV0 340 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 SIGLEC8Q9NYZ4 499 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 SMPXQ9UHP9 88 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 TRAPPC1Q9Y5R8 145 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 SMAD5-AS1Q9Y6J3 95 aa4.3□□□□□ -1.72
HMG20A-212ENST00000560986 TACC2O95359 2948 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 A0A1B0GXF2 115 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 FABP5P3A8MUU1 101 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 SLC17A3O00476 420 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 SOCS3O14543 225 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 PLXNB1O43157 2135 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 RAB4AP20338 218 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF138P52744 262 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 HILS1P60008 231 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 SNRPEP62304 92 aaKnown RBP4.29□□□□□ -1.72
HMG20A-212ENST00000560986 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 HBBP68871 147 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 TMEM78Q5T7P6 136 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 APRG1Q8IVJ8 170 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 EXOC3-AS1Q8N2X6 119 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 FRZBQ92765 325 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF479Q96JC4 524 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 NOL4LQ96MY1 436 aaPredicted RBP4.29□□□□□ -1.72
HMG20A-212ENST00000560986 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
HMG20A-212ENST00000560986 RNASE7Q9H1E1 156 aaKnown RBP4.29□□□□□ -1.72
HMG20A-212ENST00000560986 APCP25054 2843 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 TRAV25A0A0B4J276 109 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 HIGD1CA8MV81 97 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 IGHV3-23P01764 117 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 TRGC1P0CF51 173 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 CRISP2P16562 243 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 S100A2P29034 98 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 CTRLP40313 264 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 AKR1D1P51857 326 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 CMC4P56277 68 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-212ENST00000560986 SNRPD3P62318 126 aaKnown RBP4.28□□□□□ -1.72
HMG20A-212ENST00000560986 GNG5P63218 68 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 FABP9Q0Z7S8 132 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 RIGQ13278 110 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 KLF5Q13887 457 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-212ENST00000560986 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 GAGE2AQ6NT46 116 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 Q75L30 129 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 PRNTQ86SH4 94 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 KLHDC1Q8N7A1 406 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 SIGLECL1Q8N7X8 197 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 NUP35Q8NFH5 326 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 OR10J6PQ8NGY7 276 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 LINC00479Q96M42 142 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 RHPN1-AS1Q9BWJ2 59 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
HMG20A-212ENST00000560986 ASH1LQ9NR48 2969 aaKnown RBP4.28□□□□□ -1.72
HMG20A-212ENST00000560986 CR1P17927 2039 aa4.28□□□□□ -1.73
HMG20A-212ENST00000560986 TRAV34A0A0B4J273 112 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms